Gene Svir_25910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25910 
Symbol 
ID8387915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2792828 
End bp2793352 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID644976631 
Producthypothetical protein 
Protein accessionYP_003134409 
Protein GI257056577 
COG category[S] Function unknown 
COG ID[COG2306] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCC ATCCGCCGAA GCGCGAGCGG TTCGACGTGT CCGCGGGCGT CAACATCGAC 
CCGAAGGGCA TCGCGCGGTC CGTCGAGGAG TACCGCGTGG AACCGTTCGG TCTCTACATG
GCCAGGCCCA CGCCCGGCCG TGCCCAGTTC CACTATCTCG AGTCCTGGCT GCTTCCCGAC
CTGGGGTTGC GGATCACGGA TTTCTGGTTC TCCCCCGGCC ACGAACGTGA CCAGGATTTC
TACCTCGACG TCGTCACCAT CGACGTGCAC GACGACGTGT GGCTCACCAC CGACCTCTAC
CTCGATCTAG CGGTACGCAC CGGCAGGTCG GTGACCGTGC TGGACACCGA CGAACTGTTG
GAGGCCACCA CCGCCGGTCT GCTCACCCGG GAACAGGCCC GTACCGCCCT GGAACGCACC
TACCGCACCG TGGCAGCCCT CGCCGCCCAT GGCTACGACC TGCTCCGCTG GCTGGCCGAT
CTCGGTATGC CGACGACATG GCGTCGGCAT CCACCGGCCG GATAG
 
Protein sequence
MALHPPKRER FDVSAGVNID PKGIARSVEE YRVEPFGLYM ARPTPGRAQF HYLESWLLPD 
LGLRITDFWF SPGHERDQDF YLDVVTIDVH DDVWLTTDLY LDLAVRTGRS VTVLDTDELL
EATTAGLLTR EQARTALERT YRTVAALAAH GYDLLRWLAD LGMPTTWRRH PPAG