Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_25890 |
Symbol | |
ID | 8387913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2791537 |
End bp | 2792166 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976629 |
Product | putative protein-S-isoprenylcysteine methyltransferase |
Protein accession | YP_003134407 |
Protein GI | 257056575 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACCA CGGCTCTGAC GCTTTATCTG GTGTATCTGG CGACCGCCTT CGGGGTGCGC AGTCTGCTGC AGTACCGGCG CACCGGCTCG ACCGGCTTCC ACGGTGTGAG CGGCCGCCCC GGATCGCTGG AATGGTGCGG CGGCGCACTG TTCGTCCTGG CTCTGCTGCT CGGCCTCCTC GGACCCGTGC TGCAGCTGTT CGACATCCTC GATCCCGTGC GCTCGCTCGA CGCCACCCCG ATCGCGGTCG GGGGGCTGGT CCTTACGCTC GTCGGGATCA CCGCGACCCT GGCCGCCCAA CGGGACATGG GAGTCTCCTG GCGCATCGGC GTCGAGCAGA CCGAGGTCAC CGACCTCGTC GTCAACGGCG CCTACGCCTG GGTTCGCAAC CCCGTCTTCA CCGCCGTGAT CGCCACCGGG GCAGGCCTGG CCCTGATGAC ACCCAACCCC GTCGCCCTCA CCGCGTTGGT GGCACTCGTG ATCGCCATCG AAATCCAGGT CCGCGCGGTC GAGGAGCCGT ACCTGCTCCG CACCCACGGT CAGCGTTACC GTGACTACGC CGCGCGAACC GGCCGTTTCG TACCCCGCAT CGGCCGGCTG GGCACGACCA CAACCTCCCC CAACGGGTAA
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Protein sequence | MATTALTLYL VYLATAFGVR SLLQYRRTGS TGFHGVSGRP GSLEWCGGAL FVLALLLGLL GPVLQLFDIL DPVRSLDATP IAVGGLVLTL VGITATLAAQ RDMGVSWRIG VEQTEVTDLV VNGAYAWVRN PVFTAVIATG AGLALMTPNP VALTALVALV IAIEIQVRAV EEPYLLRTHG QRYRDYAART GRFVPRIGRL GTTTTSPNG
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