Gene Svir_25890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25890 
Symbol 
ID8387913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2791537 
End bp2792166 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID644976629 
Productputative protein-S-isoprenylcysteine methyltransferase 
Protein accessionYP_003134407 
Protein GI257056575 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCA CGGCTCTGAC GCTTTATCTG GTGTATCTGG CGACCGCCTT CGGGGTGCGC 
AGTCTGCTGC AGTACCGGCG CACCGGCTCG ACCGGCTTCC ACGGTGTGAG CGGCCGCCCC
GGATCGCTGG AATGGTGCGG CGGCGCACTG TTCGTCCTGG CTCTGCTGCT CGGCCTCCTC
GGACCCGTGC TGCAGCTGTT CGACATCCTC GATCCCGTGC GCTCGCTCGA CGCCACCCCG
ATCGCGGTCG GGGGGCTGGT CCTTACGCTC GTCGGGATCA CCGCGACCCT GGCCGCCCAA
CGGGACATGG GAGTCTCCTG GCGCATCGGC GTCGAGCAGA CCGAGGTCAC CGACCTCGTC
GTCAACGGCG CCTACGCCTG GGTTCGCAAC CCCGTCTTCA CCGCCGTGAT CGCCACCGGG
GCAGGCCTGG CCCTGATGAC ACCCAACCCC GTCGCCCTCA CCGCGTTGGT GGCACTCGTG
ATCGCCATCG AAATCCAGGT CCGCGCGGTC GAGGAGCCGT ACCTGCTCCG CACCCACGGT
CAGCGTTACC GTGACTACGC CGCGCGAACC GGCCGTTTCG TACCCCGCAT CGGCCGGCTG
GGCACGACCA CAACCTCCCC CAACGGGTAA
 
Protein sequence
MATTALTLYL VYLATAFGVR SLLQYRRTGS TGFHGVSGRP GSLEWCGGAL FVLALLLGLL 
GPVLQLFDIL DPVRSLDATP IAVGGLVLTL VGITATLAAQ RDMGVSWRIG VEQTEVTDLV
VNGAYAWVRN PVFTAVIATG AGLALMTPNP VALTALVALV IAIEIQVRAV EEPYLLRTHG
QRYRDYAART GRFVPRIGRL GTTTTSPNG