| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25850 |
|---|
| Symbol | |
|---|
| ID | 8387909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2787131 |
|---|
| End bp | 2788081 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644976625 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003134403 |
|---|
| Protein GI | 257056571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.573658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTGACA TCGACGAGTC CGGAGCCCGT GCCGACAAGG GCGTGCACAC CGACCCCGCC
GCGCTCGACG ACCTCACCGC CGCGGGAAGC ACCGTCGACG AGGTGGGTCC CGACGGCGCG
GTGGCGGGCT ATCGGGCGAG CCGGACGCTA CGACTGGGTG TGGAGTTACG CAGACAGCTC
CGGAGGCGGC GGACCCAACT GGTCCTCGCC CTGGTGGTGT CGCTGCCGTT CATCCTGGTG
GCCGCGTTCG AGATCGGTGA TGCGAACCCG AATCGCCGCT CCGGTGCTTT CATCGACCTG
GCCACGGCGA GCGCTCCCAA CTTCGTCGTG GTCGCGATGT TCATCTCGGG TTCGTTCCTG
CTGCCGATGA TCGTCGCCTT GTACTTCGGC GACACCGTCG CCAGCGAGGC GTCGTGGTCG
AGTCTGAAAT ACCTGCTCGC CATCCCCGTG CCGCGACATC GGCTGCTGCG GCAGAAAGCT
CTCACGTCCG CGCTGTTGTC CGGGTTGACT CTGGTGCTGT TGCCGCTGGT CGCACTGGGT
ATCGGGGTCG TGTGGTACGG CGCGGGCGAG GCGATCAGTC CGACCGGTGA CTCGGTGTCG
TTCGGGCGAA GCCTCATAGC GCTCGCCCTG GGGACCGGCT ACATCATCAT CCAGCTGTCG
TGGGTGGCCG CGTTGGGTCT GCTGCTGAGC GTGTCCACCG ACACCCCACT CGGGGCGGTG
GGTGGGACGG TCCTGGTGTC GATCCTGTCG CAGATGCTCG ACCAGATCAC CGCACTCGGG
GAGCTGCGTG ATTTCCTGCC GACGCACTTC TCCTTCGCGT GGATGGACCT CATCGCCACC
GACGTGGATT GGTCGGACAT GGCCAGTGGT GTGCTGTCGG CGGTCCTGTA CGCGACGGTG
TTCGGCCTGC TCGCGGCCCG TCGTTTCGCC ACCAAGGACA TCACCAGCTG A
|
|---|
| Protein sequence | MSDIDESGAR ADKGVHTDPA ALDDLTAAGS TVDEVGPDGA VAGYRASRTL RLGVELRRQL
RRRRTQLVLA LVVSLPFILV AAFEIGDANP NRRSGAFIDL ATASAPNFVV VAMFISGSFL
LPMIVALYFG DTVASEASWS SLKYLLAIPV PRHRLLRQKA LTSALLSGLT LVLLPLVALG
IGVVWYGAGE AISPTGDSVS FGRSLIALAL GTGYIIIQLS WVAALGLLLS VSTDTPLGAV
GGTVLVSILS QMLDQITALG ELRDFLPTHF SFAWMDLIAT DVDWSDMASG VLSAVLYATV
FGLLAARRFA TKDITS
|
|---|
| |