| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25840 |
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| Symbol | |
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| ID | 8387908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2784300 |
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| End bp | 2787134 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976624 |
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| Product | ABC-type multidrug transport system, ATPase component |
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| Protein accession | YP_003134402 |
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| Protein GI | 257056570 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.128345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCTG TCCTGACCGC GGGTGCCCTG GTGTGGTCGG ACGACGGTGA CACACAGCCC
AACTACACCA CCCATGAGGC CATCATCGAC GTGGTCGCCT CGCCGGGTTC CGAGGAACGC
GTACAACTCG ACGCCACGGT GTACGTCCCG AACGAGACCC CCGCACCGGC CGTCTTGCTA
CCGCACGGGT TCGGTGGCGA CAAGAACAGC GTCTCTCGCG AGGCGCGCGA GCTCACCGAC
CGCGGTTTCG TCGTGATGAC GTACACGGCG CGCGGATTCG GTCGCAGCAC GGGCACCATC
GCGCTGAACG ACCCCGACTA CGAGGTCGCC GACGCTTCCC AGCTCATCGA CTATCTGGCC
GACCAGCCTG AAGTACTGCT CGACGAGGAC GGTGACCCCC GGGTGGGCGT CACGGGCGCG
TCCTACGGCG GCGCCCTCGC TCTCCTGTTG GCGGGCCACG ACGACAGGGT CGACGTCATC
GCCCCCGTCA TGACCTACAA CGACCTGGCC CAGGCGCTGC TCCCCAATGA CGGGACCCGG
GGCCCCATCG ACGACGCCAC CCCCGCACCC GGCTCGTTCG CCGAAGCCGG GGTGTTCAAG
CAGGCGTGGG CGGGCTCGCT GTTCTCCGCC GGGCTCGGTC CCGCGCGTCC CGACGGACCG
GGGGTGGAGG CACCGGAGCC GGGTGACGAA CCCGGAGGTA ACGAGGACGC GACCGTCGGC
ACCGGCACCG CAGGCGCGGG TATGTCCGTT CCGGGACAGC GTTCCTCTGC CTCCCCGCCC
GCCACGATCA CGGCCAACGC GTGCGGTCGG TTCGCCGAAC AGGTGTGTGC CGCCTACATC
GACGTGGCCA CCGACGGTGT CGCCTCCGAG GAGACGCTGG AGCTGCTGCG CCGGGTCTCC
CCCGCTTCGG TCACCCAGCA CATCACCGTG CCGACGATGC TGGTACAGGG TGTGTCGGAC
ACGCTGTTCG GGCTCGCGCA GGCCGATGCG AACGCCCGCC AGATCGCCGA AGCGGGTGGC
GAGGTGTCGG TCATCTGGTA CACCGGCGGA CACGACGGTG GCGTACCGGG CCCGCAATTG
CGTTCCACCA TCGGCGACTT CCTCGAATAC CACCTCACCG GTGAGGGTGA GGATCCCGGC
ACGGGTTTCG CCTACGACGT GCAAGGCGCG CTGCGCACCA ACGGAACACC GTCCGTACGC
ACCCTGGAGG CGGGGACCTA TCCGGGGCTG GGAGCCGATC CCACCCCAAG AGAACACGTC
ACGCTCCACG GTCCCGAACA GGTGGCGCAA CGACCGCCGG GAGCCACCCC CGCCGCGGTG
AGCGGGATCC CCGGGCTCAA TCGCGTGTTC GCGAACTCGT CCCGGTTCTC GGGTCTGTTC
ACCATGGATC CGCCGGGACA ATCGGCGACG TTCGCCTCCG CACCGATGGA TTCGCAGCTA
CTGATCACCG GGGCACCGAC GGTGACGCTG AACGTCGCGG CGGCCAACGA CGCGACCCGG
GGTCGCGATG CGGTGTTGTT CGTCAAGCTG TACGACGTCA GCCCCAACGG CACACGCACC
CTTCCCGGGA ACGCGGTCGC CCCCGTCCGT ATCCCGTCAC TGCCCGCCGA CGGCACACCG
GTCCAGGTGA CGGTCACCCT TCCGGGCATC GTGCGTCCCG TGGAGGCGGG GCACAGTCTC
CAGTTGGCCG TGGCCACCAC CGACCAGGCG TACGCCACCC CGACCGAACC CGCCGCCTAC
CGCATCTCCC TGGCGGGCGA CTCGGCGTTG TCGGTTCCGG TGGTCCCCGG GACCACGGTG
ACGTCGGGAT GGCCCACGGC CCAGTTGTTG GGTATCGCCG GTGTGCTCGT GGCCGCCGCG
CTCGTGGTCG TGTTCGCGGC GCTTCGGCGC AGAAACTCGC ACGAGGTGGA TCCCGAACTG
GTCGACACAC CGCTGGTGAT CCGCAACCTC ACCAAGTCCT ATCCCGGCGG CCTGACCGCG
GTGAAGGACC TGTCGTTCCG AGTGGAACGT GGCCAGGTGC TCGGCCTGCT CGGCCCGAAC
GGTGCGGGTA AGACCACGAC GCTGCGCATG CTGATGGGCC TCATCCGCCC CACCGGAGGC
GAGATCATGG TGTTCGGCCA CCGGATCACG CCCGGTGCCC CGGTGCTCTC GCGCATCGGT
TCGTTCGTGG AGGGCTCGGG TTTCCTGCCC CATCTGTCCG GGGCGGACAA CCTGAGGCTG
TACTGGGCGA CGACCGGACG TCCCGTTGAA CAGGCCCATG TCGAGGAGGC CCTGGAGATC
GCCGGACTCG GCGATGCCAT CCACCGCAAG GTGCGCACCT ACAGCCAGGG CATGCGACAA
CGGCTCGCCA TCGCTCAGGC GATGCTCGGC CTGCCGGATC TGCTCGTCCT CGACGAGCCG
ACCAACGGGC TGGACCCGCC TCAGATCCAT CAGATGCGTG AGGTGCTGCG CCGTTACGCC
GACACGGGGC GCACGGTGCT CGTGTCGAGT CACCTTCTCT CCGAAGTGGA ACAGACGTGC
ACCCACGTCG TCGTCATGCA ACGGGGCTCG CTGGTGGCGG CCGGGGAGGT CGGCGAGATC
GTGTCGGCCG GCGGGGAGGC CACGTTCCGC GTGGACGACC CGGACAGCGC CGTCAAGGTC
CTGCGGGAGC TCGACGGTGT GGCACGAGCG GACGTCGAGG ACGGGCTCGT CCACGCGGAT
CTGGGTGGAA CACCGCGTTC GGAGGCGGTG GCGGCCCTCG TGCGCGCCGG TGTGGCGGTG
GAACAGGCAG GCCCACGGCG CCGGTTGGAA GACGCGTTCC TCCAACTGGT GGGAGAAGGA
GAACCCAAGC GTTGA
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| Protein sequence | MAAVLTAGAL VWSDDGDTQP NYTTHEAIID VVASPGSEER VQLDATVYVP NETPAPAVLL
PHGFGGDKNS VSREARELTD RGFVVMTYTA RGFGRSTGTI ALNDPDYEVA DASQLIDYLA
DQPEVLLDED GDPRVGVTGA SYGGALALLL AGHDDRVDVI APVMTYNDLA QALLPNDGTR
GPIDDATPAP GSFAEAGVFK QAWAGSLFSA GLGPARPDGP GVEAPEPGDE PGGNEDATVG
TGTAGAGMSV PGQRSSASPP ATITANACGR FAEQVCAAYI DVATDGVASE ETLELLRRVS
PASVTQHITV PTMLVQGVSD TLFGLAQADA NARQIAEAGG EVSVIWYTGG HDGGVPGPQL
RSTIGDFLEY HLTGEGEDPG TGFAYDVQGA LRTNGTPSVR TLEAGTYPGL GADPTPREHV
TLHGPEQVAQ RPPGATPAAV SGIPGLNRVF ANSSRFSGLF TMDPPGQSAT FASAPMDSQL
LITGAPTVTL NVAAANDATR GRDAVLFVKL YDVSPNGTRT LPGNAVAPVR IPSLPADGTP
VQVTVTLPGI VRPVEAGHSL QLAVATTDQA YATPTEPAAY RISLAGDSAL SVPVVPGTTV
TSGWPTAQLL GIAGVLVAAA LVVVFAALRR RNSHEVDPEL VDTPLVIRNL TKSYPGGLTA
VKDLSFRVER GQVLGLLGPN GAGKTTTLRM LMGLIRPTGG EIMVFGHRIT PGAPVLSRIG
SFVEGSGFLP HLSGADNLRL YWATTGRPVE QAHVEEALEI AGLGDAIHRK VRTYSQGMRQ
RLAIAQAMLG LPDLLVLDEP TNGLDPPQIH QMREVLRRYA DTGRTVLVSS HLLSEVEQTC
THVVVMQRGS LVAAGEVGEI VSAGGEATFR VDDPDSAVKV LRELDGVARA DVEDGLVHAD
LGGTPRSEAV AALVRAGVAV EQAGPRRRLE DAFLQLVGEG EPKR
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