Gene Svir_25400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25400 
Symbol 
ID8387864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2733348 
End bp2733848 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID644976580 
Productprotein of unknown function (DUF1707) 
Protein accessionYP_003134361 
Protein GI257056529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.7287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGG GCATCGACCC GAATGAGCTG CGTATCGGTA CGGCGGAACG GGAGGAGGCC 
AGTCGCTTCC TCGCGGAGCA CTTCGCCGAG GGCCGACTCA CGACCGCCGA GTACGAGGAT
CGGGTCGACC GTGCCCTCGC GGCTCGCACG CGAGGCGATA TCCAGCCGTT GTTCACCGAC
TTACCCGCCC CGCACCCGGC GTTCCTCAGT TCGATGCCCG ACGTCGTGGT GACGGCACCA
CAGGGCTCCG ACGTCCAGGC GCAAACGAAC GAGGCACAAC CGGTGGTGGC GTCCGACCGC
TCGGCCGTCG CGGCGGGAGT CCTGCAGCTC GTGCTGCCCT TCGGAACCGG CCGGTTCTAC
ACCGGCGAGA CACGTCTGGC CGTGCTTCAG CTCGTGTGCG TCGTCCTCAC CTTGGGGGTG
GGCGCGCTGT GGCCGATCAT CGACGGCATC ATCCTGCTCG TCGCAGGGGG CACCGACGGA
AAGGGCCGCC CACTGCAGTG A
 
Protein sequence
MNGGIDPNEL RIGTAEREEA SRFLAEHFAE GRLTTAEYED RVDRALAART RGDIQPLFTD 
LPAPHPAFLS SMPDVVVTAP QGSDVQAQTN EAQPVVASDR SAVAAGVLQL VLPFGTGRFY
TGETRLAVLQ LVCVVLTLGV GALWPIIDGI ILLVAGGTDG KGRPLQ