| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25380 |
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| Symbol | |
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| ID | 8387862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2731583 |
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| End bp | 2732518 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976578 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_003134359 |
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| Protein GI | 257056527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.732719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAGG CCGACGATCA TGACCTTCGC GTGGTCGTGG CCGCGTACGT AGATCATTTG
ACGGTCGAGC GCGGCACCGC GCGCAACACG GTGGATGGTT ATGCCCGCGA CCTACGTCGC
TACCTCGCTC ACCTGGCCGA CGCGGGAGTG ACCGACCTGC GGCAGGTGGC CCGTGACCAC
GTCGTCGGGT TCGCGGCTTC GTTGCGGCAT GGGGAGGGGG ATCGGCCCCC GCTCGCGCCT
TCGTCGGCGG CACGAGCGCT GTCGGCGGTG CGCGGGTTGC ACCGGTTCGC CCATGCCGAG
GGCTGGACGG AGGAGGACCC GGCGCGGGAT GTGCGGCCTC CGCCGCTCAC CCGGCGCCTG
CCGAAGGCAC TGCCCGTGGC CGACGTGCTG AGATTGCTCA ACACGCCCAC GGGGGACGAC
GCCCGATCGC TGCGGGACAG GGCGTTGCTG GAGCTGTTGT ACTCGACCGG TGCCCGGATC
TCCGAGGCCA CGGGGTTGGA CGTCGATGAC GTCGATCGTG CCGAGCGCAC GGTGGTGCTC
GACGGCAAAG GAGGCCGGCA GCGCCTCGTC CCCGTGGGAC GCCCGGCGTT GGAGGCGCTC
GATGCCTACC TCATACGCGC CAGGCCCGCG TTGGCGGCCA AGGGACGGGG GACGGGGGCG
GTGTTCCTCA ACGCCCGTGG GGGACGGTTG TCCCGGCAGG GTGCCTGGCA GGTGTTGAAG
GTGGCGGCCG AGCGGGCCGG CATCTCCACG CCGGTATCCC CCCACACGCT GCGGCACTCG
TTCGCCACGC ATCTTCTGGA AGGCGGGGCG GACGTGCGAG TGGTGCAGGA GTTGCTGGGA
CACGCGTCCG TCACCACCAC CCAGGTCTAC ACGCTCGTCA CCGTGAACAC GCTTCGTGAG
GTGTATGCGA CGACGCATCC GCGGGCGCTG GGTTGA
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| Protein sequence | MTQADDHDLR VVVAAYVDHL TVERGTARNT VDGYARDLRR YLAHLADAGV TDLRQVARDH
VVGFAASLRH GEGDRPPLAP SSAARALSAV RGLHRFAHAE GWTEEDPARD VRPPPLTRRL
PKALPVADVL RLLNTPTGDD ARSLRDRALL ELLYSTGARI SEATGLDVDD VDRAERTVVL
DGKGGRQRLV PVGRPALEAL DAYLIRARPA LAAKGRGTGA VFLNARGGRL SRQGAWQVLK
VAAERAGIST PVSPHTLRHS FATHLLEGGA DVRVVQELLG HASVTTTQVY TLVTVNTLRE
VYATTHPRAL G
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