Gene Svir_25300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25300 
Symbol 
ID8387854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2724457 
End bp2725380 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content71% 
IMG OID644976570 
Producthypothetical protein 
Protein accessionYP_003134351 
Protein GI257056519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0706587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACAC GACCATCCGA CGGCCCGCGT GGCGGCGACG GCACCGAGAA CGTCGTCCGC 
ACCCAGACGT TCGACGTCAA CGGCCCCGTC GAACTCGACC TCGACATCAC CGCGGGCACC
GTGGAGGTGC ACCTCGACAG GGGTGCGGGC CGGAGCAAGG ACGGTGACGG CGGTGAGGAC
GACGACCCCG CCGACACCAC CGTGGCGGTG GAGGTGCGCA GCGCCCCCTT CACGTCGCCC
GCCTGGGCGC AAAGCGCCGC CGGGGTGTTG AGCTGGGTCG GTGAGATGTT CGGCGGCCAG
GTGGGTGGAC CGTTCTCCAA CACCCCGGCC GACGCGGTGC GGGAGGTCCG TCTGGAACAG
GTGGGCGAAC GCATCGTGGT GCGCGGTCCC AAGACCCCGC CTCCGGTGAG TGCCGCGCTC
ACGGTCACCG TGCACGCCCC GGCGGGTTCA CACCTGCGGG CCCGGACGCG ACTTGCGTCC
GTCGTGGTCC GAGGGATGTG CGGACGCGCG GACATCAGCA CCGGACCGGG GAACGTGACA
CTGGACCGCG TGGTCGACTC CACCACCGTG CGCACCAGTA GCGGTGAAGT CGACATCGCC
ACGTCGAACG GGCCGGTCAC CGTGAACGGC GGCAGCGGTG ACGTGCGATT CGGTGAGGTC
ACCGCTGCGG TATGGGTACG CACCGCAGGC GGGGAGATCG TGATCGACGA CGCGGCGGCC
GGCTCGGTGG AGGCGTTCTC CGGCTCCGGG GACATCCGCA TCGGAATCCG GAAAGGCGTG
ACCGCGGAGA TCGACCTCTC CAGCGGCGGT GGCAGTGTCC ACAGCGCTCT CGACGTCTCC
GACACCCCGC CCGAGGAGTC GGCGGCGTTG ACCGTGCGCG CGCGCAGCGG AGCGGGCGAC
GTGCTGGTGA CCGGCGCCCG TTGA
 
Protein sequence
MNTRPSDGPR GGDGTENVVR TQTFDVNGPV ELDLDITAGT VEVHLDRGAG RSKDGDGGED 
DDPADTTVAV EVRSAPFTSP AWAQSAAGVL SWVGEMFGGQ VGGPFSNTPA DAVREVRLEQ
VGERIVVRGP KTPPPVSAAL TVTVHAPAGS HLRARTRLAS VVVRGMCGRA DISTGPGNVT
LDRVVDSTTV RTSSGEVDIA TSNGPVTVNG GSGDVRFGEV TAAVWVRTAG GEIVIDDAAA
GSVEAFSGSG DIRIGIRKGV TAEIDLSSGG GSVHSALDVS DTPPEESAAL TVRARSGAGD
VLVTGAR