Gene Svir_25290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25290 
Symbol 
ID8387853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2723931 
End bp2724452 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID644976569 
ProductHicB family protein 
Protein accessionYP_003134350 
Protein GI257056518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0558474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGG ATCCGTATCT CGCCGCGCTC CGGGAGAGCC TGGCCACCAC GGCTTCGGCA 
GGCGATGAGC AACTGCAGCG TGCTGCCGCA GTGCTGTCGG CCGCGCTCGA ACCCGCCGCC
CGGCTGACAC TCATGAACGC CCTGTCCGAC CTCGCCGCCG AGATCACCGC CCAGCTCCCC
GACCACGTGG TCGAGGTACG GCTGGACGGA CGTGACGTCC GTGTCGTCGT GTCGGGCAGC
GCCGAAGAAC CACCGGAAGC GGCCGAACCC CCGCCTCCCC CACCGCCGCC GCAAGAGGAG
TCCGGCGACA TCAGTCGCAT GACCCTGCGT CTGTTCGAAC ACCTGAAGAC ACAGGCCGAG
CAGGCCGCCG CCGCCCAAGG CGTGTCGTTG AACACGTTCG TGTCCCAGGC CGTCCAAGGC
GCGTTGCAGG GCAAATCGCA TCGTCGGGGG CATGGTCCGC ACGGTCACCG GGGACGAAGC
GGCCGAGGTG GAGCGAACCT GCACGGCTGG GTGAAGGGGT GA
 
Protein sequence
MELDPYLAAL RESLATTASA GDEQLQRAAA VLSAALEPAA RLTLMNALSD LAAEITAQLP 
DHVVEVRLDG RDVRVVVSGS AEEPPEAAEP PPPPPPPQEE SGDISRMTLR LFEHLKTQAE
QAAAAQGVSL NTFVSQAVQG ALQGKSHRRG HGPHGHRGRS GRGGANLHGW VKG