Gene Svir_25270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25270 
Symbol 
ID8387851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2722619 
End bp2723011 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content67% 
IMG OID644976567 
Producthypothetical protein 
Protein accessionYP_003134348 
Protein GI257056516 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.37988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAAGC TGACCATCGA TGTCCGGCCG GGTGAGTACG TGGTCGCTCG GCTGGACGCG 
GCGGCGGCGG TGCCGCCGCG GTTGCTGGAC CCCAACGCCG GCTTCGTCTC GGTCACCCGC
ACCGAGTCCG AACTGTCGGT GGTGTGTCCG GCCGAGTTGG CCCCCGCGGG AGCCGACATC
GAATCCGGGT GGCGACTGCT CGTCGTGCAA GGGACGTTGA ACCTCACCTT GACCGGCATC
ATGGCCGCGC TGGCCGGTGC GCTCGCCGCG GCGGGGGTGT CGCTGTTCGC GTTATCCACT
TTCAACACCG ATCAGTTGCT GGTGAAACAA GCCGATCTCG CTCGTGCGGT GGCAGCGTTG
AGGAACGCCG GCCACGTGGT CGACAAAACC TGA
 
Protein sequence
MRKLTIDVRP GEYVVARLDA AAAVPPRLLD PNAGFVSVTR TESELSVVCP AELAPAGADI 
ESGWRLLVVQ GTLNLTLTGI MAALAGALAA AGVSLFALST FNTDQLLVKQ ADLARAVAAL
RNAGHVVDKT