| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25050 |
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| Symbol | |
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| ID | 8387829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2697226 |
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| End bp | 2699709 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976545 |
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| Product | transglutaminase-like enzyme, predicted cysteine protease |
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| Protein accession | YP_003134326 |
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| Protein GI | 257056494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.973327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCC TGCTCGCCCC CGCCGCGGCC ATGTTCGCCA CCATCAGCGC CGCCACCTCA
CTGACCGGTG TCATCGAAGG CGGTGCTTGG CTCGCCTACA TCACCGTGGC CGCTCTCCTG
GTGGCATGCA CCGGACTCGC GCTGCGTTCG CTGCGCCTGC CCACGCTCCT GGTGGGAGCG
GCCCAGGCGT TGGCCCTCCT GCTCCTGGTC ACGGGCGCGT TCACCCGCAA CAGCATCCTG
GCCGTCATCC CCGGCCCCGC GGCGTTCGCC GAATTGGCCG ACGTACTGAC CGCCGCGTTC
GAGGAGATCA AAACCGGGGC TCCACCGGTG GAGGGCAACG TCTCGATCCT GTGCCTGGCC
ACGATCGCCA TCGGGATCGT CGCGATCCTG GTGGACGCGC TCGTCGTCGC GGCGTACGCC
CCGGCTGCCG CCGGCCTCGT TCTGCTGTGC GTCTACGCGG TGCCGTCGGC GTTGGCCGAT
GAACTGCTGC CGTGGTGGAC GTTCGTGCTC GGAGCGACAG CGTTCACCGT GCTGCTCGCC
GTGGACGGCA GTCATCGACA CCGCCGATGG CGGAACCGGT CGACCCCCGG CACGGGTGTC
TCCTTCGCCA CCGTCTCGGT CCCGGCCGTG GTGGTGGCGG GTGCGTTGTC CGCGGGGCTG
GTGGCCGGTG TCACGATCAC GGGTGTCGGC ACCGAGGGCA GACTGCCCGG CAGCAACCCG
GGTGCCCGCA CGGTGCTCGG CGGTCTCGGG GTCAACCCGT TCACCTCGCT GCGCGGCATG
CTGGACCAGG GTGACGACGT ACCCCTGTTC CGGGTCACCG GTCTCGGCGA CGACCAACGG
CTCCTGCGCG CCTTCACCCT CGACACCTAC TACCCCAACG AGGGCTGGGG ACTACCGGAC
GGTCCCATGC CCGCCGGTGT GCCCGCGAAC GGTGAACTCC CCTTCGCCCC GGGCGATGAC
GGCAGCGCTC CCAGCCGCGA GATCCGCATC GAACCCGTGC ATTGGAACGA CGTGTGGCTG
CCCGTTTTCG GCTCCCCTCG GGCTCTACAC GGTCTTTCCG AGGGCTGGTA CTACGACCGC
ACCAGTGGTT CGGTGTTCCG CGAACGCAGT CAGAACCCTG CCCCCTACGT CGAGGTGGCG
GCCCTGGAGG AACCGACGAG GGCCGAGCTG CGTCGGGCGA CCCCCACTCC CGGCGACGTC
GCCGACATCT ACACCGACGA CAGCCGCGTC GACCCGCGGG TGGCCGAACT CGCCCGGCGG
ATCACGGCGT CGGCCGACAC CACGTTCGAC AAGGTGCACG CGGTGTGGAA GTACTTCGAC
ACCGCGAACG GCTTCACCTA CGACACCCAG ACCGCTCCGA CAGCCGACAG CGACGCCCTG
GCGGACTTCG TCCTCAACGG CAAGAGGGGG TACTGCGAGC AGTTCGCCTC GGCGATGGCG
GTGATGTTGC GGTCGCTCGA CATTCCCGCT CGGGTCGCGG TCGGGTTCAC CAGCGGCTAC
CGCGACGGTG ACGTGCGCAC CATCACCTCG CGCGACGCCC ACGCATGGGT GGAGGTCCAC
TTCGGCGAAT TCGGCTGGGT GAGCTTCGAT CCCACTCCGT TGGCGGACGG CCGAGGCTAT
GTGCCGTCGT ACCTGGACAA CGAGAACGCT TCCGGTGCCG ACCGCTCCAA CGACGACGAG
TCACCGGGCA CACAACAGGA CTCGTCCCCG CAAACCCCTG ACGCGACGGA GGAACGGACG
GCGGAACAGG ACCTCGCCGC GCAGCCCGAA CAGCGACGTC CGGTCTCCGG CTCGATGTCG
TGGCTGGGTG TGGTGACGGC AGTCCTCGCC GTCGCCGCCG TGGTGGCCAC GGTCCCCCCC
ATCGTCATGG CTCGACGTCG AGGGGGGAAG CACCGTCCGA GGGCGACCAC GGGCCCCGCG
TCGTGGCTGC CCGCCTCGGC CGTGGTCCTG TGGGGTCTGA CCGTGGCTTT GGCGACCTGG
TGGGGGGTGC ACTGGGTTGC GACACTCGTC CTGTTCGCGG TAGCCGCTGT GGCCCTGACC
CCGTGGACGC TGCGTCAGCT GCAACGGCGC CACAGGCTAC GGGAAGTGGA ACAGGGCCGA
GGCACCGAAG CGACCGACGC CGCGTGGCGC GAACTGCTCC AGGAGTGCGC GGACCGCGGC
ATCGAGATCT CCGACAACGA CACCGTGCGG ATCGCCGCTC AGCGGATCGT CCAACATCAA
CGGCTCGACA AGCAGGCCAA GAACGATCTA CGCACGGTCG TCACCGTGGT CGAGCGCTCG
TGGTACAGCT CGGGAACCGA ATGGCACCCC CGGGAAGCCG CCGGGTTCGC GAAAGCGTTC
CACGGTGTCC TGGACGGGCT GGCCCGTACG GCTCCGTTGT TCTGGCAGGA CCGCCTCCTG
CCGCGTTCGA TCCTGCGGAA CGTGAGGCGG AAGACCGACG AACAGGCGAC GGGCAGGCAC
GAAAAATCCG CTGCTCGGGG CTGA
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| Protein sequence | MATLLAPAAA MFATISAATS LTGVIEGGAW LAYITVAALL VACTGLALRS LRLPTLLVGA
AQALALLLLV TGAFTRNSIL AVIPGPAAFA ELADVLTAAF EEIKTGAPPV EGNVSILCLA
TIAIGIVAIL VDALVVAAYA PAAAGLVLLC VYAVPSALAD ELLPWWTFVL GATAFTVLLA
VDGSHRHRRW RNRSTPGTGV SFATVSVPAV VVAGALSAGL VAGVTITGVG TEGRLPGSNP
GARTVLGGLG VNPFTSLRGM LDQGDDVPLF RVTGLGDDQR LLRAFTLDTY YPNEGWGLPD
GPMPAGVPAN GELPFAPGDD GSAPSREIRI EPVHWNDVWL PVFGSPRALH GLSEGWYYDR
TSGSVFRERS QNPAPYVEVA ALEEPTRAEL RRATPTPGDV ADIYTDDSRV DPRVAELARR
ITASADTTFD KVHAVWKYFD TANGFTYDTQ TAPTADSDAL ADFVLNGKRG YCEQFASAMA
VMLRSLDIPA RVAVGFTSGY RDGDVRTITS RDAHAWVEVH FGEFGWVSFD PTPLADGRGY
VPSYLDNENA SGADRSNDDE SPGTQQDSSP QTPDATEERT AEQDLAAQPE QRRPVSGSMS
WLGVVTAVLA VAAVVATVPP IVMARRRGGK HRPRATTGPA SWLPASAVVL WGLTVALATW
WGVHWVATLV LFAVAAVALT PWTLRQLQRR HRLREVEQGR GTEATDAAWR ELLQECADRG
IEISDNDTVR IAAQRIVQHQ RLDKQAKNDL RTVVTVVERS WYSSGTEWHP REAAGFAKAF
HGVLDGLART APLFWQDRLL PRSILRNVRR KTDEQATGRH EKSAARG
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