Gene Svir_24960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24960 
Symbol 
ID8387820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2689478 
End bp2689969 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID644976536 
Producthypothetical protein 
Protein accessionYP_003134317 
Protein GI257056485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.453379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGC CCGGTGGACA CGCCCGAAGC CGTCTCGGGC TGCAGCACTG GCCTCGATCA 
CGGGCGACGT TCGTCGTCAT CCTGATGGGA CTCATGTTGT GCGGCGTGGC AGCGTCGCTG
TGGCTGTCCA CCCAGGCCAT CGCCGACTCG TACCGACTGG AACGACTGCG AGAACAAAAC
GCCCAGCTCG CCGAGCACGC CGAGCAGCTA CGCCGGGAGG TCGGGCAGCT GCAGTCGCCG
TCGTCGTTGG CCGAGCGAGC CAAGTCGCTG GGCATGGTGC CGGGAGGTAA TCCCGCGCGA
TTGGTGGTGG GGGAGGACGG CTCCATCACG GTGGTGGGGG AGCCGGTGAA GGCGACCGCG
CCGGCCCCGC CGCCGGAGAA AACGGAAGAC GACGGAGACC GCGGCGACGG CAGTGCCGAA
GAGGAAGCCG AAGAGGAAGC CGACGAGAGC GCTGACGGCA ACGACGGCGA GACCGACGGC
GACGACAGGT GA
 
Protein sequence
MREPGGHARS RLGLQHWPRS RATFVVILMG LMLCGVAASL WLSTQAIADS YRLERLREQN 
AQLAEHAEQL RREVGQLQSP SSLAERAKSL GMVPGGNPAR LVVGEDGSIT VVGEPVKATA
PAPPPEKTED DGDRGDGSAE EEAEEEADES ADGNDGETDG DDR