| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24720 |
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| Symbol | gabD2 |
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| ID | 8387796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2665104 |
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| End bp | 2666717 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976512 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003134293 |
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| Protein GI | 257056461 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA CGTCGGCTAC GACGACAGCG ACGCGGGAGC AAGGTCCCGC CACGATCGGA
GGAATCGTAG GCGCTCCTTC CACCGCACGG GCCGAAGCCC TCGTCGCCAG GGTGACGACC
GGACCCGGCA GTGGATCGGT GACGGTGACC GCACCGTTCA CCGAACGCCC CACGGCCGTC
CTCCCCCAGG CGACCGACGA CATCACCCGT GCTGCCTTCG CGCGCGCCCG CCGGGCCCAA
CCGTCGTGGG CGACCACGAG CGTGGCCGAA CGGCAACGCA TCCTGTTGCG ACTGCACGAA
CTCGTGCTCG CCCACCAGGA CGAGGGACTG GACCTGATCC AGGTCGAATC GGGCAAGGCA
CGACTCGACG CCTTCGACGA GATCAGCGCC ACCGCGCTCG TGTCGGCCTA TTACGGCAAG
CACAGCGCTC GTCTGCTCGC CCCACGCCGC GCACCCGGCG TGTTCCCCCT GCTCACCCGT
GCCACCCACA TCCGCCATCC CCGAGGCGTC GTCGGGGTCA TCTCACCGTG GAACTACCCC
CTGGCCTTGA CCGCGATGGA CGTGTTGCCC GCCCTGGTCG CAGGCAACAC CGTGGTGCAG
AAGCCGGACA ACCAGACGGC GCTGTCGGCG TTGTGGCTGC ACGAACTCGC TGAACGCGCG
GGGCTGCCGC GCGATGCGTG GCAGATCGTG CTCGGACGTG GTTCGGTGAT CGGCACCGCC
ATCGCCGAGG AATCGGACTA CCTCTGCTTC ACCGGATCCA CCCCCACGGG CAAGAAACTG
GCCTCCGCCA TCGCGGGGAG GCTCACCGAC TACTCCCTCG AGCTCGGCGG TAAGAACCCG
ATGATCGTGC TGCCCGACGC CGACGTGGCC GCCGCCGCGG CCGGCGCGGT CACGGCGTGC
TTCTCCTCGG CCGGGCAGCT GTGCGTGTCC GTGGAACGGA TCTACGTCCA CGACAGCATC
CGCGACCGGT TCCTCGCCGA ATTCGTCCAA CGGACTCGAG CGCTACGACT CGGCGCATCG
CTCGACTACC GCGCCGGAAT GGGCTCGTTG ACCACCGCGG AACAGCTGCG GGCGGTCTCG
GAACACGTCG CGAACGCCCG GGCACACGGT GCCACCGTGG TCACCGGTGG CCGGGCCCGG
CCCGATGTCG GACCGTTGTT CTACGAACCG ACGATCCTCA CCGACGTCAC CGACCGGGCG
GCGCTGTTCG CCGACGAGAC GTTCGGACCG GTCGTCTCCG TCTACGGCTA CACCGATGTC
GACGACGCGA TCGAGCGGGC CAACGACACT CCGTTCGGAC TCAATGCCAG TGTCTGGTCC
CGGGACACGA GGCGGGCGCA GGAGGTCGCG ACTCGGCTGA GGACGGGAAC CGTCAACATC
AACGAAGGTT ACGCCGCCAC GTTCGGCACC GTGGGCATAC CGATGGGCGG TATGAAGGAG
TCCGGTGTCG GACGGCGCAA CGGAGCCGAC GGTTTGCTGA AGTACACCGA ATCCCAGTCG
ATCGCCGTCC AGCATGGACT GAAGTTGCGG CCGATGCGTG GTGTTCCGCC GACACTGTGG
ACGAAAGCGT TGTCCGTCGG TCTGCGGGTG TTGCGGCGGA TCCCCGGCCG CTGA
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| Protein sequence | MTSTSATTTA TREQGPATIG GIVGAPSTAR AEALVARVTT GPGSGSVTVT APFTERPTAV
LPQATDDITR AAFARARRAQ PSWATTSVAE RQRILLRLHE LVLAHQDEGL DLIQVESGKA
RLDAFDEISA TALVSAYYGK HSARLLAPRR APGVFPLLTR ATHIRHPRGV VGVISPWNYP
LALTAMDVLP ALVAGNTVVQ KPDNQTALSA LWLHELAERA GLPRDAWQIV LGRGSVIGTA
IAEESDYLCF TGSTPTGKKL ASAIAGRLTD YSLELGGKNP MIVLPDADVA AAAAGAVTAC
FSSAGQLCVS VERIYVHDSI RDRFLAEFVQ RTRALRLGAS LDYRAGMGSL TTAEQLRAVS
EHVANARAHG ATVVTGGRAR PDVGPLFYEP TILTDVTDRA ALFADETFGP VVSVYGYTDV
DDAIERANDT PFGLNASVWS RDTRRAQEVA TRLRTGTVNI NEGYAATFGT VGIPMGGMKE
SGVGRRNGAD GLLKYTESQS IAVQHGLKLR PMRGVPPTLW TKALSVGLRV LRRIPGR
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