Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_24710 |
Symbol | |
ID | 8387795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2664347 |
End bp | 2664943 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976511 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003134292 |
Protein GI | 257056460 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAC GCAGACATCG CACCCAGGCC GAACGCAGCG CTCAGACACG CACCGCCTTG CTCGACGCCA CCATCGAGTG CCTGGTGGAA CTCGGTTATG CACGGACGTC GATGCAGGAG ATCTGCGCCC GAGCAGGCGT GTCCAAGGGC GCGGCTCAAC ATCATTTCGC GGACAAGGCC GAGCTGATGG CCTCCGCGGT GGCCCACCTG ACGACGAAGC TGGCCGACCG CAACACGCCG CGAGAGGGAC GACTGGCGTC CGGACCGGGC CGTGTGGCCG AATTAGTGGA CCTGCTGTGG CGGTCGTATT CGGGCACCTT GGCCACAGCG GCGATGGAGT TGTGGGTCGC GGCGCGCACC GATCCCGCTC TCCGCGCGGC GATGCGGCCG GTGGACAGGG CACTCGGCCG CTCGACATTG GACCGACTCG CCGCCTTCCT GGACGACATT CCCCGAGAGC GCCTGGAGAC TCTGTTCTGG CTGACGGTGA ACCTGGCCCG CGGCCTCGCG CTCGACGCCG AACTGGGAGG GGACCCCCAG CGACGCGAGT TGCTGTTGGA CGAGTGGAAG CGCATCGCGA CCGCGCTCTT CGCGTGA
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Protein sequence | MSERRHRTQA ERSAQTRTAL LDATIECLVE LGYARTSMQE ICARAGVSKG AAQHHFADKA ELMASAVAHL TTKLADRNTP REGRLASGPG RVAELVDLLW RSYSGTLATA AMELWVAART DPALRAAMRP VDRALGRSTL DRLAAFLDDI PRERLETLFW LTVNLARGLA LDAELGGDPQ RRELLLDEWK RIATALFA
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