Gene Svir_24600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24600 
Symbol 
ID8387784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2652817 
End bp2653269 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content68% 
IMG OID644976500 
Producthypothetical protein 
Protein accessionYP_003134281 
Protein GI257056449 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGT CGGATCGAGC TGCACCCCAG CCGAATCAGT TCGGGTGGTT GGTGAACGAC 
TTCGTCGAGC GTGTGCCCGG TGTCGCGCAC GCTGTGGTGG TCTCGGCTGA CGGTCTTCTG
CTCACCGCGT CGAACCGGCT GCCGCTGGAC CGCGCCGATC AACTCGCGGC GGTGGCATCG
GGCCTGGTCA GTCTCACGCA AGGCGCGGCA CGTTGTTTCG AGGCGGGCGC GGTGACGGAG
ACCGTCGTGG AGATGGAGCT CGGCGTCATG GTGCTGATGT CGATCAGCGA CGGCTCGTGC
CTGGCGGTGC TGGCCGCACC GAACTGCGAC ATCGGCCAGG TCGCCTACGA GATGACGCTT
CTGGTCGACC GAGTGGGGCA GATCCTCACT CCGGAGTTGA GGGCTGCCCT GCAGGGCTCG
GGCGGACCGC GGGTCGGCGA ACCGGTGGGA TGA
 
Protein sequence
MTVSDRAAPQ PNQFGWLVND FVERVPGVAH AVVVSADGLL LTASNRLPLD RADQLAAVAS 
GLVSLTQGAA RCFEAGAVTE TVVEMELGVM VLMSISDGSC LAVLAAPNCD IGQVAYEMTL
LVDRVGQILT PELRAALQGS GGPRVGEPVG