Gene Svir_24320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24320 
Symbol 
ID8387756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2621425 
End bp2622186 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID644976472 
ProductPolyphosphate glucokinase 
Protein accessionYP_003134253 
Protein GI257056421 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.168829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA ACCGTGGGTT CGGCATCGAC ATCGGCGGAA GCGGCATCAA GGGTGCGCTG 
GTCGATCTGG ACAAGGGTGA GCTCATCGGC GACCGCGTTC GCATCGACAC GCCCAAGCCC
TCGACGCCCG ACGCGGTGGC CGCCGTCGTC AGCGACATCG TGGGCCGCTT CGACTGGGAC
GGCCCCATCG GCATCACACT CCCCGCCGTC ATCAAAAAGG GCGTCGCTCA GACCGCGGCC
AACATCGACC CCAGCTGGAT CGGACTCGAC GCTGGTGCCC TGTTCGCGGA ACGGCTGGGT
CGTGACATCG CCGACGTGGC GATCCTCAAC GACGCCGACG CCGCGGGCAT GGCCGAGATC
CGTTTCGGGG ACCCGGCCGC GAGGAAGGGG GTCGTCGCGC TGCTCACGTT CGGCACGGGC
ATCGGCAGCG CCTTGTTCCA GGACGGGACG CTCATGCCGA ACACCGAGTT CGGCCACATC
GAGGTCGACG GGCACGACGC GGAGAAGAAG GCCGCGGCCT CGGTCAAGGA CAACGAGGGC
CTCTCGTACC CGGATTGGGC CAAACGTGTC AATCGTTATC TGACCGTGTT GGAGGACCTC
ATCTGGCCGG ATCTGTTCAT CGTCGGCGGC GGGGTGAGCA AGAAGTCACA CAAGTGGGTG
CCGCTGTTGG ACATCCGAAC GCCGATCATC ACGGCATCTT TGCTGAACAA CGCGGGTATC
GTGGGAGCAG CAGCCGCGGC GCGGGAAGGC CTTTCGCACT GA
 
Protein sequence
MTANRGFGID IGGSGIKGAL VDLDKGELIG DRVRIDTPKP STPDAVAAVV SDIVGRFDWD 
GPIGITLPAV IKKGVAQTAA NIDPSWIGLD AGALFAERLG RDIADVAILN DADAAGMAEI
RFGDPAARKG VVALLTFGTG IGSALFQDGT LMPNTEFGHI EVDGHDAEKK AAASVKDNEG
LSYPDWAKRV NRYLTVLEDL IWPDLFIVGG GVSKKSHKWV PLLDIRTPII TASLLNNAGI
VGAAAAAREG LSH