Gene Svir_24300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24300 
Symbol 
ID8387754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2619862 
End bp2620476 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID644976470 
Producthypothetical protein 
Protein accessionYP_003134251 
Protein GI257056419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.107334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCTTCC TCGGGACGCT CTGCGTGGCG GCGGTGGTCG TGTGGGTGAA CGCCATCAGC 
TCCTCGCCGG ACCTCGCCGA GTCGATCGCT TGTGAACCGA GAATCGATCC GTCCGAGGGA
ACGACGTTCA CCCGCCTGCC TCACGACACC TTGCTCGAGA CGTCGCCGCT TCCCCCGTCC
TTGGTCGAGG TCACCGTGCT CAACGCGAAC GGGACCCGCG GTGAAGCCTC GATCGCCACG
GAGGAGTTGC GTCGACTCGG TTTCACCCGC GTCACGGAAC CGCGCAACGA CGAGGTGTAC
ACGGACGGAG TCGTGGCCGA CTGTCACGGA CAGATCCGCT TCGGCCCCGA GGGGGAGCGC
GCCGCTCGCA CGGTGCAGTT GATCGACCCG TGCCTCGAAC TCGTCCAGGA CGGCCGCAAC
GACGCGTCGG TGGATTTGGC CATCGGCACG AAGTTCAACG ACTTCCGGAT GTCGGACGCG
GCGGTGGACA TCCTCGACCG GCTGAAGTCG TGGGAGTCCG GTGAGGCCGC CGAGACCGAC
GAGCAGTCCC TCAACGACGA GGGTCCCGTG ATCGAGCCCG AGCTACTCAC CGAGACGCTG
CCCAAGCATT GCTAG
 
Protein sequence
MLFLGTLCVA AVVVWVNAIS SSPDLAESIA CEPRIDPSEG TTFTRLPHDT LLETSPLPPS 
LVEVTVLNAN GTRGEASIAT EELRRLGFTR VTEPRNDEVY TDGVVADCHG QIRFGPEGER
AARTVQLIDP CLELVQDGRN DASVDLAIGT KFNDFRMSDA AVDILDRLKS WESGEAAETD
EQSLNDEGPV IEPELLTETL PKHC