Gene Svir_24280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24280 
Symbol 
ID8387752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2619039 
End bp2619347 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content65% 
IMG OID644976469 
Producthypothetical protein 
Protein accessionYP_003134250 
Protein GI257056418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0940368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG ACTACGACGC TCCGCGCCGC AGCGATGCTG ACGAGCTGGC CGAGGACTCG 
TTGGAGGAAC TGAAGGCGAG GCGCAACGAG ACCCAGTCCG GCGTCGTGGA CGTCGATGAG
GACGCGACGG CGGAGAACTT CGAGCTCCCC GGTGCCGACC TCTCCGGGTT GTCGAGTGAA
GACGTGACGG TGAAGGTCGT GCCGAAGCAG GCCGACGAGT TCACGTGCTC AGTGTGCTTC
CTGGTGCATC ACCGCAGCAG GCTCGCCGAG GAGTCCAACG GTCGTTTCAT CTGCCGCGAC
TGCGCCTGA
 
Protein sequence
MATDYDAPRR SDADELAEDS LEELKARRNE TQSGVVDVDE DATAENFELP GADLSGLSSE 
DVTVKVVPKQ ADEFTCSVCF LVHHRSRLAE ESNGRFICRD CA