| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24190 |
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| Symbol | |
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| ID | 8387743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2609170 |
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| End bp | 2610552 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976460 |
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| Product | gluconate transporter |
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| Protein accession | YP_003134241 |
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| Protein GI | 257056409 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.456069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0307448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG ACGAGTGGAC ACAGACCCTC GGCGTCGGCC CCCTGCTCGG CATCGCCGTG
GCCGCGATCG CGGTACTGCT TCTCCTCATC ATCAAACTGC GGGTGCACGC CTTCCTCGCA
CTCGTGACGG TGAGCATCGC GACCGCCTTC GCCACCGGCA TCCCAGCCGA TCGGATCGTG
GACACGCTCG CCGACGGTTT CGGCTCGACG CTGGCCAACG TGGCCCTTCT GGTCGGGCTG
GGCGCCATGC TCGGCAGGCT GCTGGAGGTC AGCGGCGGGG CACAATCGCT CACCGACTCC
CTGATCCGAC GGTTCGGGGA GAACCGGGCA CCACTGGCGC TCGGTGTCGC GTCGCTGCTG
TTCGGTTTCC CGATCTTCTT CGACGCCGGG CTCGTGGTCA TGCTGCCCAT CGTGTTCGCC
GTGGCCCGCA GACTCGGCGG CGGCGTGTTG CGTTACGGCT TGCCCGCAGC GGGCGCGTTC
TCCGTCATGC ACGTCTACGC GCCACCGCAT CCAGGACCGG TGGCGGCGAG CACACTGCTC
GGCGCCGACG TCGGACTGGT GATCGTGTTC GCCGTCCTAC TCGCGATTCC GACGTGGTAC
CTCACCAGCT ACCTCTACGG CCTGTGGATC GGTAAGCGCA TCGTGCTGCC CGCCCCGGAC
ATTCTCGGCG CCAAGGAGCC CGAACGCGTC GAGAATCCAC CCCGGTCGAG CACCGTCCTG
GGCCTGTTGC TGCTTCCCCT GCTGCTCATC TTCGTCAACA CCGGGCTGAG CACCGCCAAA
GACGCGGGCT GGGTGAACAC CGACGCACAG TGGTACGGCA TAGCCCTCGC GCTCGGCTCC
ACCCCGATCG CACTGCTGCT CACCGTGTTC GTCGCGAGCT ACGTACTCGG CACCCGCCGT
GGCCGCGGTT CGGACACCGT GGAGAAGCTG CTCGATTCCG CACTCGGTCC CGTATGCGCG
ATCATCCTCA TCACCGGTGC CGGCGGCATG TTCGGCGGGG TGTTGCGGGC CAGCGGTATC
GGTGACGCCC TGTCGGGCGC GCTGGACGAC GTGGGGCTTC CGGTCTTCGT GGCCGCCTAC
GTTATCGCCA CGGCGCTGCG GGTCGCCCAA GGATCGGCGA CGGTCGCCCT GACCACCGCG
GCGAGCCTGG TACAGCCCCT GATAACCGAC GGCGCGTTCA ACTCGATCGA ACTCGTGGCG
ATCGTGCTCG CCCTCGCCGC GGGATCGGTG ACGGCGGGGC ACGTCAACGA CTCGGGATTC
TGGCTGGTAG GCCGCTTCTT CCAGATGGAC GTCAAGACCA CGCTCAAAAC CTGGACGGTC
ATGCAGACCA CCATCGGTCT CGTGGGTTTC GCCCTGTCCG GCGTCCTGTT CCTGGTGGCC
TGA
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| Protein sequence | MNTDEWTQTL GVGPLLGIAV AAIAVLLLLI IKLRVHAFLA LVTVSIATAF ATGIPADRIV
DTLADGFGST LANVALLVGL GAMLGRLLEV SGGAQSLTDS LIRRFGENRA PLALGVASLL
FGFPIFFDAG LVVMLPIVFA VARRLGGGVL RYGLPAAGAF SVMHVYAPPH PGPVAASTLL
GADVGLVIVF AVLLAIPTWY LTSYLYGLWI GKRIVLPAPD ILGAKEPERV ENPPRSSTVL
GLLLLPLLLI FVNTGLSTAK DAGWVNTDAQ WYGIALALGS TPIALLLTVF VASYVLGTRR
GRGSDTVEKL LDSALGPVCA IILITGAGGM FGGVLRASGI GDALSGALDD VGLPVFVAAY
VIATALRVAQ GSATVALTTA ASLVQPLITD GAFNSIELVA IVLALAAGSV TAGHVNDSGF
WLVGRFFQMD VKTTLKTWTV MQTTIGLVGF ALSGVLFLVA
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