Gene Svir_23670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_23670 
Symbol 
ID8387691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2559963 
End bp2560640 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID644976416 
Producthypothetical protein 
Protein accessionYP_003134198 
Protein GI257056366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.172627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTCC TCCTGCCCGG CGCGGGTTCC ACACCGTGGT ACTGGCATCG GGTCGATCGG 
GAGCTGCATG CCCTCGGCCA CGCCGTCACC GCTGTTCGTC TGCCGTGTGA GAAGCGTTCG
GCCGGACTCG CCGAATACGC CGACACGGTG GTCTCCGCTG TCGGCGAGCG GCGCGAGGTG
GTGGTGGTCT CGCACTCGTT CGGGGCTTTC ACCGCTCCGC TGGTGTGCGC CCGGTTGTCG
GTGCGGGCAC TCGTCCTGGT GGCACCGATG ATCCCCGCTT CCGGGGAGTC GGCCGCGCAG
TGGTGGGAAC GCACCGGGCA GCCGGAGGCG CAACGTGACT TCGCGCTGCG CGAAGGCCGG
GATCCCGACG CCGAACCGAG CCTGGACGAG CTGTTCCTGC ACGACCTTCC CCCCGAACTC
GCGGAGGCCG CACTGCGGTA CGGGGAGTGT GAACAGGCGT CGACCCCGTT CGAACAACCC
TGGCCCCTGG CCGCGTGGCC CGACGTTCCC ACACACGTGG TGGCTTTTCG GCACGACCGT
CTGTTCCCCG TGGAGTTCCA ACGGCGGATC GCACGCGAGC GCCTGTCCGT CACCCCTGAC
GAACTCGACG GTGGCCACCT GGCCATACTC GGCAATCCGG GGGAACTCGC CCGCCGACTG
GCGTCCTACG TTGCGTGA
 
Protein sequence
MFVLLPGAGS TPWYWHRVDR ELHALGHAVT AVRLPCEKRS AGLAEYADTV VSAVGERREV 
VVVSHSFGAF TAPLVCARLS VRALVLVAPM IPASGESAAQ WWERTGQPEA QRDFALREGR
DPDAEPSLDE LFLHDLPPEL AEAALRYGEC EQASTPFEQP WPLAAWPDVP THVVAFRHDR
LFPVEFQRRI ARERLSVTPD ELDGGHLAIL GNPGELARRL ASYVA