Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23670 |
Symbol | |
ID | 8387691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2559963 |
End bp | 2560640 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976416 |
Product | hypothetical protein |
Protein accession | YP_003134198 |
Protein GI | 257056366 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.172627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGTCC TCCTGCCCGG CGCGGGTTCC ACACCGTGGT ACTGGCATCG GGTCGATCGG GAGCTGCATG CCCTCGGCCA CGCCGTCACC GCTGTTCGTC TGCCGTGTGA GAAGCGTTCG GCCGGACTCG CCGAATACGC CGACACGGTG GTCTCCGCTG TCGGCGAGCG GCGCGAGGTG GTGGTGGTCT CGCACTCGTT CGGGGCTTTC ACCGCTCCGC TGGTGTGCGC CCGGTTGTCG GTGCGGGCAC TCGTCCTGGT GGCACCGATG ATCCCCGCTT CCGGGGAGTC GGCCGCGCAG TGGTGGGAAC GCACCGGGCA GCCGGAGGCG CAACGTGACT TCGCGCTGCG CGAAGGCCGG GATCCCGACG CCGAACCGAG CCTGGACGAG CTGTTCCTGC ACGACCTTCC CCCCGAACTC GCGGAGGCCG CACTGCGGTA CGGGGAGTGT GAACAGGCGT CGACCCCGTT CGAACAACCC TGGCCCCTGG CCGCGTGGCC CGACGTTCCC ACACACGTGG TGGCTTTTCG GCACGACCGT CTGTTCCCCG TGGAGTTCCA ACGGCGGATC GCACGCGAGC GCCTGTCCGT CACCCCTGAC GAACTCGACG GTGGCCACCT GGCCATACTC GGCAATCCGG GGGAACTCGC CCGCCGACTG GCGTCCTACG TTGCGTGA
|
Protein sequence | MFVLLPGAGS TPWYWHRVDR ELHALGHAVT AVRLPCEKRS AGLAEYADTV VSAVGERREV VVVSHSFGAF TAPLVCARLS VRALVLVAPM IPASGESAAQ WWERTGQPEA QRDFALREGR DPDAEPSLDE LFLHDLPPEL AEAALRYGEC EQASTPFEQP WPLAAWPDVP THVVAFRHDR LFPVEFQRRI ARERLSVTPD ELDGGHLAIL GNPGELARRL ASYVA
|
| |