| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23090 |
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| Symbol | |
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| ID | 8387633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2484992 |
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| End bp | 2485999 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976362 |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_003134144 |
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| Protein GI | 257056312 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.55516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.173246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA TTTTGCCGTC CGAGGTGAGT GCCACTCAGC AGCTGGTGCA ACCCGCACTA
CGCGAGGCGG TCACCACGCT GACACCCGCG ATGCGACGTA TCGTCAGCTA CCACTTCGGT
TGGACCGACG AGCACGGGGA GGTCGTGAAC GGAGGGGGAG GCAAGGCGTT GCGGCCCGCG
CTCGCCCTGC TCGCGGCCAG AGCCGTAGGG GCCCCACCGG AATCGGCGCT TCCGGGCGCT
GTCGCCGTGG AGCTGGTGCA CAACTTCTCC TTGCTGCACG ACGATGTCAT GGACGGCGAC
ACAGAGCGTC GCCACCGGCC CACCGCATGG CGGTTGTTCG GCACCCCGGC CGCCATCCTG
GCGGGTGACG CGCTGTTGAC ACTCGCCATG GAGGTGCTGG ACTCGGTGGG GGAGCGTTCC
GCCAATCAGC GTCTGGCCGC TGCGGTGCAC AGATTGATCG AGGGGCAGAG CGCCGACATC
GAGTACGAAA GCCGCACGAT CGTCAGCGTC GAGGAGTGCC TGGACATGGA GGACGGCAAA
ACCGCGTCGC TCATGGCGTG CTCGGCCGAA CTCGGGGCGC TGTTGGGCGG AGCCGATGAC
CGGACAGTCG CGGCGTTGGG GGATTTCGGA CGCAATCTGG GAATGGGTTT CCAGCTCGTC
GACGATCTGC TCGGCATCCT CGGCAGCCCG GAGGTCACCG GTAAACCCGT GCTGGCCGAC
CTGCGGGTGC GGAAGAAGTC GGTTCCTGTG GTGGTGGCCT TGAACGCGGA TACCGACAGT
GCGGCGGCGT TGCAGGAGTT CTACCGGCGA GAACGCCCGC CCAACGAGGA CGATGTGCGC
ACGATGGCGG CATTGATCGA GGACACGGGC GCCATCACGT GGACTCGGGA GCGCGCCCAC
CGTTATATCG CCGCGGCCGA GACCAGCCTC GCCACGGTGA ATCCGCCCGA GGAGGTCCGT
GCGGCACTGG CCGATCTCAC CCGTTTCGTC GTGGAGCGTG ACCGATGA
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| Protein sequence | MTAILPSEVS ATQQLVQPAL REAVTTLTPA MRRIVSYHFG WTDEHGEVVN GGGGKALRPA
LALLAARAVG APPESALPGA VAVELVHNFS LLHDDVMDGD TERRHRPTAW RLFGTPAAIL
AGDALLTLAM EVLDSVGERS ANQRLAAAVH RLIEGQSADI EYESRTIVSV EECLDMEDGK
TASLMACSAE LGALLGGADD RTVAALGDFG RNLGMGFQLV DDLLGILGSP EVTGKPVLAD
LRVRKKSVPV VVALNADTDS AAALQEFYRR ERPPNEDDVR TMAALIEDTG AITWTRERAH
RYIAAAETSL ATVNPPEEVR AALADLTRFV VERDR
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