| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23030 |
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| Symbol | |
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| ID | 8387627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2477658 |
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| End bp | 2478914 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976356 |
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| Product | hypothetical protein |
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| Protein accession | YP_003134138 |
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| Protein GI | 257056306 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.131719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGG CAGCAGGCCA CCCGGCGGAG GGCGAGGTCT CCTCGCCCGC GAGGACCGCT
CTGCGCGTCC TCGCCACCGC GATGCTGGAA GACCTCGATG CCCTCGCCGA CCGACTCACC
CTGTTGGTGA TGCGCGCCGA ACCCGGCTAC GCCGAACTCG GTGTCTCCGC GCCCGACGCG
CTGCGGGAGA ACCTCAGGGG GAACCTCGAA CGCGGCATCC AGTCACTGGG CAAGCTCGTG
CCGCCCGGGG TCGACCCGAA CGACACCTCC CGGGAGACCG GCCGCAAACG TGCCAGGGAG
GGCGTGCCTT TGGAGGCGGT CCTCCACGCC TACCGCCTGG GCGGCCAGGT GATCTGGGAA
GGGTTGTTGT CGACGTCGCG GGACCGGTTC CGCGGCCGCT ACGACCGGGA GTTGTTGGCC
GTGTCGGGAT GGGTGTGGCG AGTGATCGAC GCCAGTTCGG CGGCGCTCGT CGACGCCTAC
CGGCTGGAGG AGTCACGACT GCGCAGTCAG GAACTGAGCA AACGTCATGC CTTCCTCAAC
GCCCTGCTGG ACGGGAGGGG GAAGGACACG ACCGTCGCGC AGGAGGCCGC CACGGTGCTC
GGGTTGCCGA CGTGCGGGCC GATGCTGTGC GTGGTCGCCC TGCTCGACAC CCCGACCGAC
GAACCGTTGC GCTCTCCGAG GGACACACTC GCCGCCCACG GACTGGTGTC GTCATGGCAC
GTGCGATCGT CCGACATCGT CGGATTGATC GCGCTCGCCG ACCGCACGCC GGCCGACGTG
CTGGCCGCTC TCCGTCCCGC GGTGATGGGT CGGGTGGGCG CGTCACCGGT GATCACCACG
CTCGGCCAGG TCGGTGACGC CTACACGTTG GCCCGCACCG CGGCGAGGAC GTTGGGCGCA
CCGGGAATGG CGTTCCTCGA CGATCATCTG CCCGAGGCGC TACTCGTCGA CAGTCCTGAG
TTGACCGAGC GACTCACCCA GGTGGCGTTC GGTGAGCTGC TCCGTCTTCC CGAGGCCGAA
CGGGAGACGT TGCTGGCCAC ACTGGGCGCG GTGATCGACA GCGGTGGTTC CCCGACCCGT
GCGGCACAAC GGCTGTACTG CCACCGCAAC ACCGTCATCT ACCGCCTCCA ACGCATCGAA
TCGATCACCG GTCGGTCGGT GTCGCATCCC CGCGACCGAC TGTTGTTCAC CCTCGGACTG
CTGGCGGTAC ACCGTCGCAC CACGTCCGAC GCCCTCTCGG AAGGTCCCGG ACACTGA
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| Protein sequence | MTTAAGHPAE GEVSSPARTA LRVLATAMLE DLDALADRLT LLVMRAEPGY AELGVSAPDA
LRENLRGNLE RGIQSLGKLV PPGVDPNDTS RETGRKRARE GVPLEAVLHA YRLGGQVIWE
GLLSTSRDRF RGRYDRELLA VSGWVWRVID ASSAALVDAY RLEESRLRSQ ELSKRHAFLN
ALLDGRGKDT TVAQEAATVL GLPTCGPMLC VVALLDTPTD EPLRSPRDTL AAHGLVSSWH
VRSSDIVGLI ALADRTPADV LAALRPAVMG RVGASPVITT LGQVGDAYTL ARTAARTLGA
PGMAFLDDHL PEALLVDSPE LTERLTQVAF GELLRLPEAE RETLLATLGA VIDSGGSPTR
AAQRLYCHRN TVIYRLQRIE SITGRSVSHP RDRLLFTLGL LAVHRRTTSD ALSEGPGH
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