Gene Svir_22940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22940 
Symbol 
ID8387618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2466562 
End bp2466957 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content63% 
IMG OID644976347 
Productmolecular chaperone (small heat shock protein) 
Protein accessionYP_003134129 
Protein GI257056297 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.558061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.436135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCG ACTTCCGCGA CCTGTTCGAC ATGCTGCCCA GCCTGAGCAG CCTGCGTCCG 
GCGATGGACA TACACAGCAT CCGGATCGAG GACAAGCTCG AGGGCGACAC CTACATCATC
CGGGCCGAAC TGCCGGGGAT CAACGTGGAC GAGGACCTCG ACATCAGCGT CCAGAACAAT
CTGTTGACCA TCGAGGCGCA ACGTTCCGAG GAACAGACGG AGAACGGCCG CTCCGAGTTC
CGCTACGGCT CCTTCGTCCG CACCGTGGCC TTGCCCGAAG GTGCGCAGGA GGACAGCATC
GACGCCTCCT ACGAGGACGG CATCCTCACC ATACGGGTGA AGTTGAGCAA GCCCGAGGAG
AAGAAGGCCC GGCAGATCCC GGTGCGACAC GGCTGA
 
Protein sequence
MLPDFRDLFD MLPSLSSLRP AMDIHSIRIE DKLEGDTYII RAELPGINVD EDLDISVQNN 
LLTIEAQRSE EQTENGRSEF RYGSFVRTVA LPEGAQEDSI DASYEDGILT IRVKLSKPEE
KKARQIPVRH G