| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22790 |
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| Symbol | |
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| ID | 8387603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2450719 |
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| End bp | 2452455 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976332 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_003134114 |
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| Protein GI | 257056282 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.998017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.640022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGG TGGCCGAGCA GTTGGTGGAC CTGCTGGTGC AGGCCGGGGT GCGGCGCCTC
TACGGCGTCG TGGGCGACAG TCTCAACCCG GTCACCGACG CCGTGCGACG GCATCCGAAG
ATCGAGTGGG TGCAGGTGCG GCATGAGGAG GTCGCCGCCT TCGCCGCCGG TGCCGAAGCG
CAGATCACCG GTCGGCTGGC GGCGTGCGCC GGAAGCTGTG GACCGGGAAA CCTGCACCTG
ATCAACGGCC TGTTCGACGC GCATCGCAGC ATGGCCCCCG TCGTGGCCGT GGCCGCGCAC
ATCCCGAGTG AGGACATCGG CACCGCCTAC TTCCAGGAGA CGCACCCCGA CCGGCTGTTC
GTCGAATGCA GCCACTACTC GGAGATGGTG TCGACCCCCG AGCAGATGCC GCAGGTGGCA
CAGATCGCCA TCCAGACCGC GATCGGTCGG TCGGGTGTGT CGGTCATCAG TTTGCCGGGC
GATGTCGCGG GGATGGACGT GCCGCGCAGG CGGGCGGAGA TAACGCTGGT GCCCCGGCCC
CCCACGGTGC GGCCGGGTGA GGCCGAACTC GATCGGTTCG TCGAGATCGT CGACGAGGCG
GAACGGGTGA CGTTGTTCTG CGGCAGCGGC ACCGCCGAAG CGCACGACGA GGTGATGGCC
TTCGCCGATC GGGTGCTCGC CCCGGTGGGA CACGCGCTTC GGGGCAAGGA GTGGATCCAG
TACGACAACC CGTTCGATGT GGGGATGTCG GGTTTGCTCG GCTACGGGGC GGCCTACGAG
GCGATGCATG AGTGCGATCT GTTGATCCTG CTCGGCACGG ACTTCCCTTA CCGGCCGTTC
TTGCCGGACG ACGTGAGGAT CGTGCAGGTC GACATCCGGC CGGAGAACCT CGGTCGCAGA
TCGCGGTTGG ATCTCGGCAT CAGCGGTGAC GTGGGGGAGA CGTTACGGTG CCTCACCCCG
CGGGTGCGAC GCAAGACCGA TCGCCGTTTC CTCGACCGTA TGCTCCGTAA ACACGCCGAT
GCGCTGGAGC GGGTCATCGC CGCCTACACC ACGGACGTGG AACGGCACAA GCCCATCCAT
CCCGAGTATG CGGCGTCCAT ATTGGATGAA GAGGCGGCGG ACGACGCGGT TTTCACCGTG
GACACGGGAA TGTGCAACGT ATGGGCCGCC CGCTACATCA CCCCCAACGG GCGGCGTCGG
GTGATCGGCT CGTTCACGCA CGGTTCGATG GCCAACGCCA TGCCCCAGGC GATCGGCGCG
CAGTTGCCCG AGCGGGGGCG CCAGGTCATC GCCATGGCGG GTGATGGAGG GTTCTCCATG
CTCATGGGGG ATTTCCTCAC CATCGTCCAG TACGGGCTGC CGGTGAAGGT GGTGGTGTTC
AACAACTCCT CGTTGAGCAT GGTGGACCTG GAGATGCTGG TGGCGGGCCT GCCTCCACAC
GGCACCGAAT ACCCCGACGT CGATTACGCG GCCATCGCCC GCGCCGCCGG AGCCCATGGT
GTGCGCGTCG AGGACCCGAA GGACGTGCGT TCCGGGCTGC GCGAAGCGCT GGACCACGAC
GGGCCCGCGC TCGTGGACGT CGTCACCGAC CCGAACGCGT TGTCGATGCC CCCGCGCATC
ACCGGTCAGC AGTTGACGGG TTTCGCCCTG GCGACCAGCA AGATGGTGCT CCAGGGCGGG
GTCGGCCGCA TGGTCCAGCT CGCGCGTTCG AACCTGCGCA ACATCCCGAG GCCGTAG
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| Protein sequence | MATVAEQLVD LLVQAGVRRL YGVVGDSLNP VTDAVRRHPK IEWVQVRHEE VAAFAAGAEA
QITGRLAACA GSCGPGNLHL INGLFDAHRS MAPVVAVAAH IPSEDIGTAY FQETHPDRLF
VECSHYSEMV STPEQMPQVA QIAIQTAIGR SGVSVISLPG DVAGMDVPRR RAEITLVPRP
PTVRPGEAEL DRFVEIVDEA ERVTLFCGSG TAEAHDEVMA FADRVLAPVG HALRGKEWIQ
YDNPFDVGMS GLLGYGAAYE AMHECDLLIL LGTDFPYRPF LPDDVRIVQV DIRPENLGRR
SRLDLGISGD VGETLRCLTP RVRRKTDRRF LDRMLRKHAD ALERVIAAYT TDVERHKPIH
PEYAASILDE EAADDAVFTV DTGMCNVWAA RYITPNGRRR VIGSFTHGSM ANAMPQAIGA
QLPERGRQVI AMAGDGGFSM LMGDFLTIVQ YGLPVKVVVF NNSSLSMVDL EMLVAGLPPH
GTEYPDVDYA AIARAAGAHG VRVEDPKDVR SGLREALDHD GPALVDVVTD PNALSMPPRI
TGQQLTGFAL ATSKMVLQGG VGRMVQLARS NLRNIPRP
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