Gene Svir_22530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22530 
Symbol 
ID8387577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2425862 
End bp2426752 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID644976306 
Producthypothetical protein 
Protein accessionYP_003134088 
Protein GI257056256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0620133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.97816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA CCGAGATCCT GAGCGAAGAC GAGTGGCGGG CTCGAGAGGA CGCCCATGTA 
CGGCGGATGC GGCTGTGGAC GGAGCCGCAC AAACGACGCC GATCGCGGGG CGAGAAGCAT
CCCGTGCTCG ACTTCCTGTT CACGTACTAC TCACTGCCGC CGTCCCGCCT GGAAAGGTGG
CAGCCGGGTC CGGGCGTGGT GTTGCGGGGC TCCGCCGCGC GCCGCTTCCT GCGCCGTCCG
GGCTATCGCG AAACCGCGGA CGGTGTCGTT CTCGACGAAG CGGCGTTCAC CGACAAACTC
GCGCGCACCA CGCGACACAC CCTGTCACTG TTGGAGGCGA TCCACGCCCG CCGCGCCCGG
TTCGACTGCT TCGGGCTGCA CGAGTGGGCC ATGGTCTACC GAGCCACACC GGAGCGGATC
CGACACAGCC AGGTCCCGTT GCGTTTGGGG GCGGCGGGAA CCGACGTGGT GGTCGACACC
CTTAGTGTGC GCTGCAGTCA CTTCGACGCC TTCCGGTTTT TCACCGAGGA GGCGAAGCCG
CTCAACCGCT ACACGCCCAC CCGACAGGCA CAGCGGGAGC TGGATCAGCC CGGCTGTCTG
CACGTCGGCA TGGACCTGTA CAAGGCCGCG TACAAACTCG GGCCGTTCAT ACCGTCGGAA
CTGCTCGGTG ACTGTTTCGA ACTCGCCGTC GACATCCGAG AGCTCGACAT GCGAGCCAGC
CCGTACGACC TGTCCGAGTA CGGCTACTCC CCCGTGCCCA TCGAGACGGC CGAAGGCCGT
GCGACCTATG TCCGACAGCA AGCGGAGTTC TCACGTCGTG CCGCGCCGTT GCGGGAGAAG
CTCATCCGAC ACTGCCGTGA GTTGCTGGAC ACTCATAGCA ACATGAAGTA A
 
Protein sequence
MTMTEILSED EWRAREDAHV RRMRLWTEPH KRRRSRGEKH PVLDFLFTYY SLPPSRLERW 
QPGPGVVLRG SAARRFLRRP GYRETADGVV LDEAAFTDKL ARTTRHTLSL LEAIHARRAR
FDCFGLHEWA MVYRATPERI RHSQVPLRLG AAGTDVVVDT LSVRCSHFDA FRFFTEEAKP
LNRYTPTRQA QRELDQPGCL HVGMDLYKAA YKLGPFIPSE LLGDCFELAV DIRELDMRAS
PYDLSEYGYS PVPIETAEGR ATYVRQQAEF SRRAAPLREK LIRHCRELLD THSNMK