| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21880 |
|---|
| Symbol | |
|---|
| ID | 8387512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2355453 |
|---|
| End bp | 2356601 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644976241 |
|---|
| Product | Xaa-Pro aminopeptidase |
|---|
| Protein accession | YP_003134023 |
|---|
| Protein GI | 257056191 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.122866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.121364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGTC GTTCGCTGCA CACACCCGCC CCCGATGCCT CCACGCTGCG TGCCCGACTC
GACCGTGCCC GAGCCGCCGC GGCCGACGCA GCCACGGACG CGTTGTTGAT CGCGCCCGGC
TCCGACCTGC GGTATCTGAT CGGACAGGCG GGTGGGTCCT TCGAGCGACT CACCACGCTG
GTCGTGCCCG CATCCGCCGA GGCCGAACCG ATCCTGCTGC TACCGAAGCT GGAAGCCCCC
GGATACGCCG ACATCCCGAC CGACGAACTC GGCGTGGAAG TGGTCACGTG GGTCGACGGT
GACGATCCGT ACCGGATGGT CGCCGACCGG TTGGGCCGAC CAGGGCGAGT GGCGGTGAGC
GACACGATGG CCGCCCTGCA CGTCCTCGGA CTGCGGGACG CGGTGTCCGA CGCCGAACAG
GTCCTCGCCG GGCCGATCCT GCGGCAGCTG CGGATGCGTA AGGACGCCGC CGAACTCGCC
GCGCTGCGCA AGGCGGCCGA GGCGATCGAC CGGGTCCACG CGCGGATGGG CGAATGGTTG
CGGCCGGGGC GCACCGAGGC CGAGGTGGGG GCGGACATCA CCGAGGCGAT CGTCGCCGAG
GGCCACACGC ACGCCGACTT CGTGATCGTC GGTTCCGGGC CCAACGGGGC CAGCCCACAC
CACGACGTGT CCGATCGGGT GATCCAGCCC GGTGACGTGG TGGTGGTCGA CATCGGCGGA
CCAATCCCCG AGGGCTACAA CTCCGACTGC ACGCGCACCT ACGCTGTGGG GGAACCCCGC
GATGCCGACG TGGCGGACAC GTACGCGGTA CTGCAGCGCG CGCAGGCCGC GGCCGTGCGG
GCGGTGCGGC CCGGGGTGAC GGCGCAGGAG ATCGACGCGG TCGCCCGTGA GATCATCACG
GAGGCCGGCT TCGGCGCGAA CTTCATCCAC CGCACCGGTC ACGGTATCGG TCTCGACGTG
CACGAGGAGC CCTACATCGT GGCGGGTAAC GACCTTCCGC TGGAGCCCGG CATGGTGTTC
AGTGTCGAAC CGGGCATCTA CCACGCCGGA CGTTGGGGTG CCCGCATCGA GGACATCGTC
GTAGTCACCA CCGACGGGGG CGAGCCGTTG AACAGGCGTC CCCACGAGCT GATCGTGCTT
CCGGCATGA
|
|---|
| Protein sequence | MSRRSLHTPA PDASTLRARL DRARAAAADA ATDALLIAPG SDLRYLIGQA GGSFERLTTL
VVPASAEAEP ILLLPKLEAP GYADIPTDEL GVEVVTWVDG DDPYRMVADR LGRPGRVAVS
DTMAALHVLG LRDAVSDAEQ VLAGPILRQL RMRKDAAELA ALRKAAEAID RVHARMGEWL
RPGRTEAEVG ADITEAIVAE GHTHADFVIV GSGPNGASPH HDVSDRVIQP GDVVVVDIGG
PIPEGYNSDC TRTYAVGEPR DADVADTYAV LQRAQAAAVR AVRPGVTAQE IDAVAREIIT
EAGFGANFIH RTGHGIGLDV HEEPYIVAGN DLPLEPGMVF SVEPGIYHAG RWGARIEDIV
VVTTDGGEPL NRRPHELIVL PA
|
|---|
| |