Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_21870 |
Symbol | |
ID | 8387511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2355001 |
End bp | 2355456 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976240 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003134022 |
Protein GI | 257056190 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.16811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0441488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACG GAGGACTGGA GCCACTGGAC CGGGCCATCG TGCGGGAACT GGCCGTCGAC GGCCGGCGTA GTTTCACCGA ACTGGCCGAG CGGGTCGGGC TGTCGGTGTC GGCTGTGCAT CAGCGGGTGC GGCGGCTGGA ACAGCGGGGA GTGATCCGCG GCTACACCGT TCGGCTCGAC GGGGAGCAGA TCGGCCTCCC GTTGACGGCG TTGATCTCCC TGACGCCGAA CGATCCGGCC GCGCCTGACG ACTATCCGCA GCGGCTCGAA CACATCCCGG AGATCGAGTC GTGCTACTCG GTGGCCGGTG ACGAGTCGTA CGTGCTGTTG GTGCGGGTGG CGTCCCCCTT GGCCCTGGAG GACCTGTTGC GCCGCATCCG AGAGGCGGCC AAGGTGTCCA CGCGCACCAC CGTGGTGTTG TCCACGCCGT TCGAAGGCCG TTCGCCGAAC CTGTGA
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Protein sequence | MTNGGLEPLD RAIVRELAVD GRRSFTELAE RVGLSVSAVH QRVRRLEQRG VIRGYTVRLD GEQIGLPLTA LISLTPNDPA APDDYPQRLE HIPEIESCYS VAGDESYVLL VRVASPLALE DLLRRIREAA KVSTRTTVVL STPFEGRSPN L
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