Gene Svir_21870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21870 
Symbol 
ID8387511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2355001 
End bp2355456 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID644976240 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003134022 
Protein GI257056190 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.16811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0441488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACG GAGGACTGGA GCCACTGGAC CGGGCCATCG TGCGGGAACT GGCCGTCGAC 
GGCCGGCGTA GTTTCACCGA ACTGGCCGAG CGGGTCGGGC TGTCGGTGTC GGCTGTGCAT
CAGCGGGTGC GGCGGCTGGA ACAGCGGGGA GTGATCCGCG GCTACACCGT TCGGCTCGAC
GGGGAGCAGA TCGGCCTCCC GTTGACGGCG TTGATCTCCC TGACGCCGAA CGATCCGGCC
GCGCCTGACG ACTATCCGCA GCGGCTCGAA CACATCCCGG AGATCGAGTC GTGCTACTCG
GTGGCCGGTG ACGAGTCGTA CGTGCTGTTG GTGCGGGTGG CGTCCCCCTT GGCCCTGGAG
GACCTGTTGC GCCGCATCCG AGAGGCGGCC AAGGTGTCCA CGCGCACCAC CGTGGTGTTG
TCCACGCCGT TCGAAGGCCG TTCGCCGAAC CTGTGA
 
Protein sequence
MTNGGLEPLD RAIVRELAVD GRRSFTELAE RVGLSVSAVH QRVRRLEQRG VIRGYTVRLD 
GEQIGLPLTA LISLTPNDPA APDDYPQRLE HIPEIESCYS VAGDESYVLL VRVASPLALE
DLLRRIREAA KVSTRTTVVL STPFEGRSPN L