| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21310 |
|---|
| Symbol | |
|---|
| ID | 8387455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2292420 |
|---|
| End bp | 2293235 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133971 |
|---|
| Protein GI | 257056139 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.421552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCATT CGCCAACCTC TGCTGGCGTC CAGGTCCGCC GCCTGTCCTA CGGCTTCTCC
CCACATCACG TCGGTGAGCT CCGGCAAGCG GAGAGCTCGC GGGGCATCGT CATGATTCTC
CACGGTGGCT TCTGGCGGTC TCACCGCACT CTGGACATGA CCGCCCCGAT GGCCGAGGCC
TTGACCCTCC GCGGATTCGA CACCTGGAAC GTCGAGTACC GCCGAGGTAG TCGTGGAACC
TGGTCGGAGA CCCTCTCCGA CGTCGCCGCC GCATTCGATC ACATCGAGGC GCTCGCCGAC
GAGTATTCCC TGAACACCGA ACGAATCCTC CTGTTCGGCC ATTCGGCCGG CGGACACCTC
GCCGCGTGGT GTGCGGGACG GTCGGCGACC GCGTCCCGCC ACGGTGCCAC CCCTCCCCCT
CTCCCCGTTC ACGGACTGGT CACAGCGGGC GCGGTACTCG ACCTCGCCGC CGGGGCCAGG
GAAGGGATAG GCGAGGACGC GGTCGTCGAA TTCCTCGACG GGGGACCGGA GGACGTGCCC
GAGCGATACG CCGAGGCGGA CCCCGTCCGG CGCGTTCCCA CGAACGTTCC CACGTACTGC
GTGCACAGCG CCAAGGACGA ACGAGTCCCG TTTGGACAAT CCGTCCGCTA TATCCGAGCG
GCTCGACAAG CCGGCGACGA CATTTCCCTC ATCGCGGCCC GCGGGAACCA CACGGACTGC
ATCACGGTGG GACACATCGA CTTCGAACTC GTCGTCCACG GACTGGAAGA GCTCGCGTCG
ATGGCCCCAC GGCACGCGGG TAGGGACGCA CCGTAG
|
|---|
| Protein sequence | MRHSPTSAGV QVRRLSYGFS PHHVGELRQA ESSRGIVMIL HGGFWRSHRT LDMTAPMAEA
LTLRGFDTWN VEYRRGSRGT WSETLSDVAA AFDHIEALAD EYSLNTERIL LFGHSAGGHL
AAWCAGRSAT ASRHGATPPP LPVHGLVTAG AVLDLAAGAR EGIGEDAVVE FLDGGPEDVP
ERYAEADPVR RVPTNVPTYC VHSAKDERVP FGQSVRYIRA ARQAGDDISL IAARGNHTDC
ITVGHIDFEL VVHGLEELAS MAPRHAGRDA P
|
|---|
| |