| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21230 |
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| Symbol | |
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| ID | 8387447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2282767 |
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| End bp | 2284026 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644976181 |
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| Product | transcriptional activator of acetoin/glycerol metabolism |
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| Protein accession | YP_003133963 |
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| Protein GI | 257056131 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.259809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.259363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTGGG CGGCACCCGC TCTCGGCTTC ACCACGGCGG CGCGGGAGGT GACCGTGAGC
GTGCCCAGTG CCGTCCCGCC GGGTCGGAGC CTTCCTGACC ACGCGCGTGA CCTCATCCGT
ATGCACGAGG CCGTCATCTC GGGGCGGCGG CCGCCGATGC GCCCGCGTGG GATCGTCTTC
CGGTCGTGGT CGCGGGTACG CCGTCTCGGA CTGCAAGCCG ATGCGCTCAA TGTCCGTGGC
CGCCTGGCCG GGGAAGAGCT GGCACTGCGC CGGGAGGTCT CACCGCTGCG GGGCGTCGTG
ACGGAGCTAA GACAGGTGGT CGGTGCGATG TCCGACGCCT CCCACGTGCT GCTGGTCATC
ACCGACCGAG ACGGCGTGGT TCTCTGGCGG GAGGGAACGC CCGCGGTTCG ACGGCGGGCC
GATGGGCTCG GGTTCTGCGA GGGGGCGGAG TGGAGTGAGA GACGGGTGGG GACGAACGCC
ATCGGCACCG CACTCGTCGA GGCGGCTCCG GTCGAGCTGC TCGCCGGGGA GCATTTCGAA
CGGCGGCAGC ACTCCTGGTA CTGCACCGCG GCCCCCGTCC ATGACCCGAG GACGGGGGAA
CTGCTCGGCG TGATCAATGT CAGCGGTCCC GCGTTGACCC TGCACCCGGC GATCGGTGCG
TTGGTGGAGA CCGGACGGCG TTTGGCGGAG TCTCGGCTGT GGCAGCGGCA TCGAGAGCGG
CTGGATCGGC TTCGTCGGGT GGGAGAGCCG GTACTGGCCG CGGGGCCGGC GTTGGTGGTC
GACGACGAGG GGTGGGTGGC CGCCAGTGCG GGGGTGTGGG TGGGTGACCG GATCGCGGTG
CCCTCGGGTG ACGGGGAGCC GGTCGTGGTG CCCGGGTTGG GTGTATGTCA TCCCGAGAGG
CTGGGGGAGG GGTGGCTCAT CCGGCCGTCG GGTTCCGATC GGGCCGTGCG GCTCGAGCTG
GACCTCACCC GCACGCCGAC GCTCAGCCTG TGGGGTGGTG ACGTCGACTG GCGGAGACCG
CTGACGAGAC GGCACGCCGA GATCCTGGTG CTGCTGCATC GTGCCGGGCC CGCGGGGCTG
TCGGCCGAGG CGTTGAGCCG GGCGTTGTAC GGGGACGCCG AGCACGTGGT CACGGTGCGG
GCGGAGGTGT CGCGGTTGCG GCGGCTGCTC GGTGCGTTGG TGAACACCCG GCCGTATCGG
CTGGCCGATC AGGTGTCGAT GTCGGTCCAC CCCTCCCAGG CGGCGGCTGC CGAGGCGTGA
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| Protein sequence | MSWAAPALGF TTAAREVTVS VPSAVPPGRS LPDHARDLIR MHEAVISGRR PPMRPRGIVF
RSWSRVRRLG LQADALNVRG RLAGEELALR REVSPLRGVV TELRQVVGAM SDASHVLLVI
TDRDGVVLWR EGTPAVRRRA DGLGFCEGAE WSERRVGTNA IGTALVEAAP VELLAGEHFE
RRQHSWYCTA APVHDPRTGE LLGVINVSGP ALTLHPAIGA LVETGRRLAE SRLWQRHRER
LDRLRRVGEP VLAAGPALVV DDEGWVAASA GVWVGDRIAV PSGDGEPVVV PGLGVCHPER
LGEGWLIRPS GSDRAVRLEL DLTRTPTLSL WGGDVDWRRP LTRRHAEILV LLHRAGPAGL
SAEALSRALY GDAEHVVTVR AEVSRLRRLL GALVNTRPYR LADQVSMSVH PSQAAAAEA
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