Gene Svir_21180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21180 
Symbol 
ID8387442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2273633 
End bp2274637 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID644976176 
Productpredicted multicopper oxidase 
Protein accessionYP_003133958 
Protein GI257056126 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.689075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGA AGTACGCTCG AACCGGCGCG TTCGGGAAGA AGGTTTCCCG CCGTTCGATG 
TTGGTCGGCG CCGCGGCCGG CATGGCCGCC CCGGTCGTTG CCTCAACCGT CGGGGGGACG
ACCGCGACAG CCGCTCCGAA CAGGGCCGGC GATTCCCAAG GTGAGATCCG GCGCATCACC
ATGTACGCCG AGGAACTTCC AGGCGGCATG ATCGGTTACG GGCTTGAGCC CGGCAAGGCC
ACGGTCCCCG GTCCCGTCCT GGAGATGTGG GAGGGGGACA CCCTCGAGAT CGAGTTGGTG
AACAACACCG ACCACCGGTT GTCCATCCAC CCCCACGGGG TCGAGTACGA CACGGAGTCC
GACGGCAGCC CGCTCAACGA CTCCTTCAAC AACCCGGGGG AACGGCGGAC CTACATCTGG
CGCAGTCGAG CCCCGTACCA GGCCAAGGAC GGCACCTGGC GACCGGGCAG CGCCGGTTAC
TGGCACTACC ACGACCACGC CATGGGCACG GACCACGGCA CGGGCGGAGT GCTCAGAGGA
CTCTACGGCG CACTGGTCGT TCGACGTCCA GGGGACATCC TGCCGGACCG GCAGTACACG
ATCGTGTTCA ACGGAATGAC GATCAACAAC AGGGTGGCTC CGGACGCGCC CATCTTCGAG
GCCCGACTCG GCGAGCGGGT CGAGTTCATC GCCATCGGCC ACGGAGACCA CTTCCACACC
TTCCACCTGC ACGCCCATCG TTGGGCGGAC AACCGCACCG GATTGTTGTC CGGTCCGGAC
GACCCGACCC CCATCATCGA CAACAAGGAC CTCAATCCGG GCTCCTCCTT CGGATTCCAG
GTCATCGCCG GTGAAGGGGT CGGCCCGGGT GCGTGGATGT ACCACTGTCA CGTGCAGTTC
CACTCCGACG ACGGCATGGC CGGGATCTTC CTCGTCCGCA ACGAGGACGG CAGCCTGCCC
CCGGGAGCGG AGGAGGCACT GGAGCGTTAC CGCAACCACG GCTAG
 
Protein sequence
MIRKYARTGA FGKKVSRRSM LVGAAAGMAA PVVASTVGGT TATAAPNRAG DSQGEIRRIT 
MYAEELPGGM IGYGLEPGKA TVPGPVLEMW EGDTLEIELV NNTDHRLSIH PHGVEYDTES
DGSPLNDSFN NPGERRTYIW RSRAPYQAKD GTWRPGSAGY WHYHDHAMGT DHGTGGVLRG
LYGALVVRRP GDILPDRQYT IVFNGMTINN RVAPDAPIFE ARLGERVEFI AIGHGDHFHT
FHLHAHRWAD NRTGLLSGPD DPTPIIDNKD LNPGSSFGFQ VIAGEGVGPG AWMYHCHVQF
HSDDGMAGIF LVRNEDGSLP PGAEEALERY RNHG