Gene Svir_20990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20990 
Symbol 
ID8387423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2247335 
End bp2249221 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content66% 
IMG OID644976157 
ProductCalcineurin-like phosphoesterase 
Protein accessionYP_003133939 
Protein GI257056107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.972856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.125199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTGTT TGGTGAGAGA ACGGAACAAG ACACGCATCG GCGTGACGGC GCTCGCCACG 
CTCGCGGTCG TCGCTTCCGG CACCGCGGTC GTCACCGCGC CGGAGGCGGC GGCGTCTTTC
CCGCGGGGAG AGTGGAACGA GACCGCCTAT CGAGGTCAGG TCGAGGTCAT CCCCGCCAAG
GACGACCGGT CGGACCGTCG TGTCCTGCGG GGCAAGGTGT TCGTCGACCG GGACCGGGAC
AGCGTCAGTG ACCCGGGGGA ACGGGGCCTG CGCGGGGTCA TGGTGTCCAA CGGCCGCGAC
GTGGTCACCA CCGACGCCCG CGGGTACTAC GAACTTCCCG CGTACGACAA CATGACGGTG
TTCGTCACCC AGCCGGCCGG GTACCAGGTG CCGGTCGATG AGTACAACAT CGCCCAGTTC
TACTACCACC ACCTGCCGCA AGGCTCCCCC GAACTGCGCT ACGGGGGGAT CGCCCCCACC
GGACCCCTTC CCGAGGCGGT GAACTTCCCG CTCGTGGAAA GCCGTGCCAC GCACACCAAG
GACCAGAACT GCGTGATCGC GGGGGACCTT CAGACCTACG ACAAGACCGA GGTGGAGTAC
GCGCGCAAGG GCGCCATCAA CGACCTCGCG CAACGTCACG ACTACACCGG CTGCGGTGTC
CTGTTCGTCG GTGACATCGT GGGGGACGAC CTGTCGCTCT ACCCCGACGT GAAGGACCTG
ACCAAATCAC TGAACGGTCC GGTCCGGTTC CTGCCGGGCA ACCACGATCT CGACTACGAC
GCCAGGACCC CCGAGCACTC GTTCGACACC TTCCGGGCAC AGCTCGCCCC GGCCTACTAC
TCCTACGACG TCGGCAGGGT CCACGTCGTC GCGTTGAACA CGGTGCGCTA CCCGTGCACG
CCGGATGTGG ACAACCCGGA CGGCAAACGG CCGGGCTGTG ATGATCCGGA GAACAAGCCG
ACCTACAACG GTCGTCTCGA CGAACGGCAA CTCGAGTGGT TGCGGAAGGA CCTCGCCAAG
GTTCCCCGCA ACAAACTCGT CGTGATCGCC AGCCACATCG GTCTGGTGAA CTACGCCGAC
GAGGGGAGTC CCGTCCACCA GGTCGACCAG GTCCGCGAGG TGTACGACCT GCTGAAGGGC
CGCAAGGCCG TCGCCGTCTC CGGGCACAGT CATTCGATCG AGAACATGAA GACCGGTGAC
CTCGCCAAGG GCTGGAGTGA CCTCTTCGGA CTGAAGGGAC TGCCGTTCCC CCACATCACC
GCGGGGGCGA TCTCCGGTGA CTGGTACTCC GGTCAGATGA CCGAGGACGG TTATCCCATC
GCGGTCGGGC GTGACGGGGG CCGGCCGGGT GTGGTGACGC TCGAGATCGA GGGCAACAGG
TTCCGGGAAC GCTACACCGT GACCGGGCAG AGCGACCGGT TCCAGACGCA GCTGGGGCTG
AACACCCCGA CCTACCGGGA CTGGTACGAG GCACGTCAGG AGTGGAACGC AAACCCCGAG
GGCCCGGCTC CGGAACTCGG TGATCCGCAT GTGGTGAGCC GTGACGACCT GGCCGGGACC
ACGTGGTTGA CCACGAACTT CTGGATGGGC TCCACCGGCT CCCGGGTCAA GGTGAGCATC
GACGGCGGCC CGGCTCGCTG GGCCACCCGT ACCCAGCAGA TGCGCGGTGA GGACCAGAAC
GTCGGTCCGG AATGGTCTGA CCCGCACGCC GTGGCCCAAC AGTTGGTCCA CGGCGGGAGT
GTCGCGGACC GGTCGATGCA CCTGTGGCGG TTCGCGCTGC CGGAGGATCT CGCCGTGGGC
ACGCATCGCG CTGAGGTCAC CGCGATCGAC TCCTACGGGC GGAGGTTCAC CGATGCTTTG
ACCTTCGAGG TCGTCGAGCA GCGGTGA
 
Protein sequence
MRCLVRERNK TRIGVTALAT LAVVASGTAV VTAPEAAASF PRGEWNETAY RGQVEVIPAK 
DDRSDRRVLR GKVFVDRDRD SVSDPGERGL RGVMVSNGRD VVTTDARGYY ELPAYDNMTV
FVTQPAGYQV PVDEYNIAQF YYHHLPQGSP ELRYGGIAPT GPLPEAVNFP LVESRATHTK
DQNCVIAGDL QTYDKTEVEY ARKGAINDLA QRHDYTGCGV LFVGDIVGDD LSLYPDVKDL
TKSLNGPVRF LPGNHDLDYD ARTPEHSFDT FRAQLAPAYY SYDVGRVHVV ALNTVRYPCT
PDVDNPDGKR PGCDDPENKP TYNGRLDERQ LEWLRKDLAK VPRNKLVVIA SHIGLVNYAD
EGSPVHQVDQ VREVYDLLKG RKAVAVSGHS HSIENMKTGD LAKGWSDLFG LKGLPFPHIT
AGAISGDWYS GQMTEDGYPI AVGRDGGRPG VVTLEIEGNR FRERYTVTGQ SDRFQTQLGL
NTPTYRDWYE ARQEWNANPE GPAPELGDPH VVSRDDLAGT TWLTTNFWMG STGSRVKVSI
DGGPARWATR TQQMRGEDQN VGPEWSDPHA VAQQLVHGGS VADRSMHLWR FALPEDLAVG
THRAEVTAID SYGRRFTDAL TFEVVEQR