Gene Svir_20370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20370 
Symbol 
ID8387364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2174006 
End bp2174860 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID644976099 
Producthypothetical protein 
Protein accessionYP_003133881 
Protein GI257056049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0877904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAC TGATGCGGCG GGTCGTCGCC GCGGCGGCCG GGATGGTCGT CGCCGCGCTA 
CTCGCCCCCA GCGCAGCCGG TGCGACGACC ACCGACGCGG ACATCACACA GACCGGTGGG
ACAGGACCGT ACCCGGCGAG CTACGAAACC GTGCCCGACC TTCCGAACCA CACCGCCTAT
CGCCCGAACT CCCTGCCCAC CGACGAGACG TTGCCGATCG TCGCGTGGGG CAACGGCGCG
TGCCGCGCGG ACGGCACCTG GTTCGAGAAC ATCCTCACCG AATTCGCTTC GCACGGATTC
CTGGTGATCG CCAACGGTAA GCCGAACGGT TCGGGACAGA CGTCGCCGGA CATGCTCCTC
GAGGCGGTCG ACTGGGCCAT CGCGGAGAAC GCGAACCCGA CCAGTAAGTT CCACGGCCGG
ATCGACACCG CCAACATCGC GGTGATGGGT CAGTCCTGCG GCGGTTTGGA GACCATGGAG
GTCGCCGACG ACCCGCGCAT CACCACGACC GTGATGTGGA ACAGCGGGAT CATCAACCCG
CTCGACAAGC GGCAGCTGCG ACGCCTGCAC GCGCCCATCG CCTACTTCGT CGGCGGCCCG
TCCGACATCG CCTACCGCAA CGCCATGGAC GACTGGGAGC GGTTGCCGGC CGGTCTACCC
GCGTTCATGG GCAACCTGGA CGTCGGCCAC TCCGGCACCT ACGCCGAGCC CAACGGCGGT
GAATTCGGTC GTGTCGGGTC GAACTGGTTG AAGTGGCGGC TGAAGGGTGA CGCGACCGCT
CGCGCGGAGT TCGTCGGCCC CGACTGCGGG CTGTGTTCGA CCGAATGGGA CGTGCAGCAG
AAGAATCTGT CCTGA
 
Protein sequence
MAGLMRRVVA AAAGMVVAAL LAPSAAGATT TDADITQTGG TGPYPASYET VPDLPNHTAY 
RPNSLPTDET LPIVAWGNGA CRADGTWFEN ILTEFASHGF LVIANGKPNG SGQTSPDMLL
EAVDWAIAEN ANPTSKFHGR IDTANIAVMG QSCGGLETME VADDPRITTT VMWNSGIINP
LDKRQLRRLH APIAYFVGGP SDIAYRNAMD DWERLPAGLP AFMGNLDVGH SGTYAEPNGG
EFGRVGSNWL KWRLKGDATA RAEFVGPDCG LCSTEWDVQQ KNLS