| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20150 |
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| Symbol | |
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| ID | 8387342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2147755 |
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| End bp | 2148726 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976078 |
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| Product | predicted Na+-dependent transporter |
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| Protein accession | YP_003133860 |
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| Protein GI | 257056028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.226359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0276347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGC GACGTGGACC GCTCACGACG ATCGTCGATT TCGCCAGCCG CTGGTTCGCG
GGACTCGTCC TGGCCGGTGG GCTGGTGGGG CTGGTGCTCC CCGACCAGAC GGCGAGACTG
TCAGAGCACG TGCCCCTGCT CCTCGGGGTG ATCATGTTCG GGATGGGGCT GACCCTGCGG
CCCGTCGATT TCGCACTCGT GTTGCGCCGC CCCTGGGCCG TGTTGTGCGG CCTGAGCGCG
CAGTTTGTCA TCATGCCGTT GACGGCGGTG GCGGTCGGTT GGCTCTTCGG GCTGTCCGGT
CTGCTGTTGA CCGGCATGGT GCTCGTCGGC TGCGCTCCCG GGGGCACGGC CTCCAATGTG
ATCGTCTACC TCTCGCGGGG CGATGTCGCG TTGTCGGTGA CGCTGACCTC GGTGGCCACG
ATGCTCTCGC CGGTGTTGAC CCCGCTGTTG GTGCTCTGGC TGGCCGATTC GGAGTTGCCC
GTGGGCTTCA CGGACCTGTT CTCCTCGATC GTGCAGGTGG TCCTGCTCCC GGTGACGGCG
GGTCTGGTGC TGCGGGTCGT GGCGGGGCGC TACGTGAAGA AGGTGCTTCC GTATCTACCG
CTGGTCTCGG TCACCGGCAT CGTCGTCGTG GTCGCCGCCA TCGTCGGTGC CAACGCCGAC
GCCGTGGTCT CCAGTGGAAT CCTGCTGGTG GCGGCGGTCA TCGTGCACAA CGGGCTGGGT
CTGCTGCTGG GCTACTTCGC GGCGAAGCTC GCACGACTCG ACGAGTCGGC CTGCCGCGCG
GTGAGTGTGG AGGTCGGCAT GCAGAACTCC GGACTGTCCG CCAGTCTGGC CACCGCACAC
TTCACCCCGT TGGCGGCGCT GCCCGCCGCC TTGTTCTCCG TGTGGCACAA CGTGTCGGGT
TCGATATTGG CGAGCTACTG GGCCAAGCGT CCGACGCGGA AGACACAGCG GCGGTCCGCA
CGGCGGAGGT GA
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| Protein sequence | MGARRGPLTT IVDFASRWFA GLVLAGGLVG LVLPDQTARL SEHVPLLLGV IMFGMGLTLR
PVDFALVLRR PWAVLCGLSA QFVIMPLTAV AVGWLFGLSG LLLTGMVLVG CAPGGTASNV
IVYLSRGDVA LSVTLTSVAT MLSPVLTPLL VLWLADSELP VGFTDLFSSI VQVVLLPVTA
GLVLRVVAGR YVKKVLPYLP LVSVTGIVVV VAAIVGANAD AVVSSGILLV AAVIVHNGLG
LLLGYFAAKL ARLDESACRA VSVEVGMQNS GLSASLATAH FTPLAALPAA LFSVWHNVSG
SILASYWAKR PTRKTQRRSA RRR
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