| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20130 |
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| Symbol | |
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| ID | 8387340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2145990 |
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| End bp | 2147063 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976076 |
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| Product | nucleoside-diphosphate-sugar epimerase |
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| Protein accession | YP_003133858 |
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| Protein GI | 257056026 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00890692 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTCGTGA CCGGAGCGAC CGGCAACGTC GGGACGGCGT TGCTGCGACA ACTTACGACC
ACGGACGAGG TGCGTGTCAT CGGCGTGGCC CGCCGTGTCC CGGAACCGGA CGCCGAACCG
TACCGGAACG TCCACTGGGT ACCGTGTGAT CTCGGCGAAC CCGATGCCGT GGACACACTC
ACCACGGCCC TCGACGGCGC CGACGTCGTC GTCCACCTGG CATGGGCGAT CCACCCGCGA
CAGGACGAAC CCTCTTTGTG GCGTACCAAC GTCACGGGCA CCCGCCACCT GCTCCAGGCC
ATCGCACGGA CCGGGGCGGA CCACGTGATC GCGGGGTCCT CGGTGGCCGC CTACACGCCC
GCGCCACACT GGTCGCGGGT CAGCGAGAAC TGGGCCACCG ACGGGATCGG CACCAGCGCC
TACAGCCGGA GCAAGGTGTG GCTGGAACGG GAGCTCGATG CGTTCGCCCA CGACCATCCC
GGTATCGCGT TGAGCAGGAT CCGGCCGTGC GCGATCGTGC AACGCGACGC CGCGGGTGAG
TTCGCCCGAT GGCTGCTCGG CGCACTCGTG CCCAGCAGTT GGGTCGGACG GCCCTGGCTG
CCCCTCCCCC TGTGGCCGAA CCTGCGGCTT CAGCTCATCC ACGCCGACGA CGTGGCCACC
GCGATCGTCG CTGTCCTCGC CCGACGTGCC GAGGGGGCGT TCAACGTCGC CGGCGAACCC
GTACTGCGTC CCCACGACAT CGCCGACGCG CTCGGCGGGG TCCGCCTCCC CCTCCCGAAA
CCGGTGGTGT CGGCGGCCAG TCGACTCGCC TGGCGCACCG GCTTGCACCC ACTTCATCCG
GGCTGGTTGG AACTTGCCGA CAAGGCCGCA CTCGCCGACA CCACCCGGGC CAGGACCGAA
CTGGGGTGGG AGCCCGCCCA CGGCGCCGTG GAGACGTTGA GGTCCCTGGC GGTGGGCCTG
CGTGAGGACG CCGGCACCAC GAGCGCTGTC CTGGCACCGC ACGCCTTCGG GTCGCTGTAT
CAGCGGTGGA AGACCGCGAC GTGGGGCAGG CCGAGCCACC AATCCCAGGA CTGA
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| Protein sequence | MVVTGATGNV GTALLRQLTT TDEVRVIGVA RRVPEPDAEP YRNVHWVPCD LGEPDAVDTL
TTALDGADVV VHLAWAIHPR QDEPSLWRTN VTGTRHLLQA IARTGADHVI AGSSVAAYTP
APHWSRVSEN WATDGIGTSA YSRSKVWLER ELDAFAHDHP GIALSRIRPC AIVQRDAAGE
FARWLLGALV PSSWVGRPWL PLPLWPNLRL QLIHADDVAT AIVAVLARRA EGAFNVAGEP
VLRPHDIADA LGGVRLPLPK PVVSAASRLA WRTGLHPLHP GWLELADKAA LADTTRARTE
LGWEPAHGAV ETLRSLAVGL REDAGTTSAV LAPHAFGSLY QRWKTATWGR PSHQSQD
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