| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19870 |
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| Symbol | |
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| ID | 8387314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2118082 |
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| End bp | 2119722 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976050 |
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| Product | hypothetical protein |
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| Protein accession | YP_003133832 |
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| Protein GI | 257056000 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03459] carotene biosynthesis associated membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000329069 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000517384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCACCA CCACCGATTC CGTGGCGAGC GCCGAGGCGC CCATGGAGGA GTCCGCAGCA
GAAGCAGCAC GGGCAGCCGC CCGTGCCCGT GAGTCGTCCC GCTTTCCGTA CCGCACCATC
GCGATGGGGG TCGTCGGCAG CATCGTGATG CTGCTCGCCG CCCCCGGCGC GGCCGGCACC
CTCGTGCGTG ATCCGATCAT CGGCACGGGA CCGTTGTCGT GGATGCGGTA CGGCCACGGG
CACGTCCTGT CCACCGCCGT GCTCTACGTC GGCTTCGCAC TGGTCGTCTG GGCGTGGGTG
AGATTGGGCC GGTACGTGCT GGCCGGTCGG ATCGGCACCA AACCCATCCT GGTCGCCGCG
TTCGCGTGGA TGGCCCCGTT GCTGATCGCG CCCCCACTGT TCACCCGGGA CGTGTTCTCC
TACCTCGGGC AAGGGGCGCA GCTGCTGCAC GGGCTCAACC CCTACGACTA CGGGCCCGCC
GCGCTGGATG TGCTCCCGGA CGTGGTGCAG AACGTGCACC CGCTGTGGCA GACCACCCCC
GCGCCGTACG GTCCGCTGTT CTTGCTGGTG GCCAAGAACG TCGTGGGCAT CACCGGCAAC
AACATGATCG CCGGGGTGAT CCTGACCCGA CTGGTGCTGC TGCTGGGGTT GGCCGGCATG
CTCTGGGCCC TGCCGAGGCT GGTGCGGCAC CTGGGGGGAC GGTTGCCGGT GACCATGTGG
CTGGCCGTGG CCAGCCCGAT GACGGTGATC CACCTGGTCG GCGGCCCGCA CAACGACCTG
TTGATGCTGG CGTTTTTGAC CATCGGCGTG TGGGCCGCGC TGGAACACAA ACACGCGTTG
GCCATCGCGC TCGTCACGAT CGGCATGCTC ATCAAACCCA CCGCCGCGAT CGCGTTGCCG
TTTTTGGTGT GGGTGTGGGC CAACCACCTG CCGGGCGAGG AGAGCTTGTT CCGCCGGTTC
GTCAAGGCGG TCACACCGTC GCTGGCGATC TTCGGTGTGG TGTTCACGGC GGGCACGTGG
GTGTCTTTGG GCTCGTTCAA CCTCGGTTGG GTCACCGGGC TGCAGGCGCC CCAGATCATC
GCCAACTGGT TGAACTTCCC CACCGGTCTC GGGGAAGTGG CGCACACCCT GGTGAACTTC
GTGGTCGACG TGCCGGTGTC ACCGTTTGTC ACCGTGGCGC GGGGCCTGGC CTGGATGGCG
CTGCTCGGGG TGATGGTGTG GCAGTGGTGG AAGGCCCGCC ACGGTGGGCG CGAGGCCATC
CTGCGCATGG CCATCACCTT GCTGGCGGTG GCGTTGTTCG CACCACCGAC CCTGCCGTGG
TACCTCACCT GGGGCTTCGT GGTCGCCTCC GCGTTCGCGT GGCGTCGGAT CCACCTCGCG
GCGATGGTGG CCGTGTCGGT GTTCTTGGTG TTGGTGTACT ACCCGACGGG TGAGCAGAGC
CTCTACGACT GGTGGTTCAT CATCGGCGTG ATCGCCGCCA GCCTCTACGG CGCGGCGTCG
CTGTGGAAAC CCGACCCGCT GGGGCTGGTC GCGGCGTGGC GCCGCCGCGG CGACCAGTTC
ACCTCTGATA CGGAGGACAC CCCGCAAACC GGTCGGGAGT CGGAACATCC GACGACGCCG
ACCAGCCGCG CCACGTCGTG A
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| Protein sequence | MATTTDSVAS AEAPMEESAA EAARAAARAR ESSRFPYRTI AMGVVGSIVM LLAAPGAAGT
LVRDPIIGTG PLSWMRYGHG HVLSTAVLYV GFALVVWAWV RLGRYVLAGR IGTKPILVAA
FAWMAPLLIA PPLFTRDVFS YLGQGAQLLH GLNPYDYGPA ALDVLPDVVQ NVHPLWQTTP
APYGPLFLLV AKNVVGITGN NMIAGVILTR LVLLLGLAGM LWALPRLVRH LGGRLPVTMW
LAVASPMTVI HLVGGPHNDL LMLAFLTIGV WAALEHKHAL AIALVTIGML IKPTAAIALP
FLVWVWANHL PGEESLFRRF VKAVTPSLAI FGVVFTAGTW VSLGSFNLGW VTGLQAPQII
ANWLNFPTGL GEVAHTLVNF VVDVPVSPFV TVARGLAWMA LLGVMVWQWW KARHGGREAI
LRMAITLLAV ALFAPPTLPW YLTWGFVVAS AFAWRRIHLA AMVAVSVFLV LVYYPTGEQS
LYDWWFIIGV IAASLYGAAS LWKPDPLGLV AAWRRRGDQF TSDTEDTPQT GRESEHPTTP
TSRATS
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