| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19700 |
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| Symbol | |
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| ID | 8387297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2101348 |
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| End bp | 2102412 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976033 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_003133815 |
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| Protein GI | 257055983 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0129569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAAGC CGGCAAACCT CTCCGACATC ACGGTACGGG ACGCGACACT CGAATACCTG
GAGATCCTCG AACGACGTGT GATGCGCTCA CAGCTGAGCG CCGCCACGCT CACCTCCTAT
CGCCGCGACC TCCTCGAATT CACCACTCTC CTGGGCCCGG ACACCGACCT GGACTCGATC
GAGGCCGACG ACCTGGAGAT CGCGCTGACC ACATTGGCCA AATCACCGGA CCGCCGGTAC
CGCGTCGGGG TGAAGATCGC CGAGGACGGC TCCACTCCCC CGGGTCGGGG TCCGTACTCG
CTCGCTCGCT GGTTCACGGC CGTGCGCGGC TTGTTCCGGT GGGCGGTCGA CAAAGGGTAT
GTGCAGGTGG ACCCCACCGT GAAGGTCACC CCTCCCCGGG TTCCCACGCG GGTGGGTGGC
ACGCGGGTCG GTCTTCGGCT CGACGAGGCG CTGACCCTGC GCGAGGCGCC CGCGGTGCGG
TCGTCCGGAC AGTTGCGGGC CGATCAGCGG TTGAGTTTGC GGGACGAGGC GATCCTGCGT
CTGCTGGTCG AGTCAGGACC TCGTGTGTCG GAACTGTGTG GGGCGAATCG CAGCGATATC
CGCGTGCACG AGGAAACCGG CACGCCGGTG CTGCATGTGC GCGGTAAGGG GCGTAAGGAT
CGCGATCTGC CGTTGTCGAA ACCCACGGTC GAGGTGATCG AGCGGTACCT GGCCGAGGAG
CGTCCCGCTC CCCCGACGCC GCAGCGGCCG CACGACATGG TGGAGCGTCG CAGGATCGAC
GACGCCGCTG GGGCGTTGTT CGTGTCCGTT CGTGGTTGGC GGTTGTCGCC CCGCGATGTG
CAGCGCATGG TGCAGCGGTA CGCGAAGGAG TTCTTGGGGC GGCGCGCTAC TCCGCATTCG
CTGCGGCATA CGGCGCTGAC GGTGTTGGCG CGGGCGGGTG TGGACATCGC GACGGTGGCG
CAGATCGCTG GGCATGCGAG TCTGTCGACG ACGTCGGTGT ACATGGACGA CTCGATGAGC
GCGGCGGTGG AGGCGATCGC GGAGTCTCCT TTGGCGCGGC CGTGA
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| Protein sequence | MAKPANLSDI TVRDATLEYL EILERRVMRS QLSAATLTSY RRDLLEFTTL LGPDTDLDSI
EADDLEIALT TLAKSPDRRY RVGVKIAEDG STPPGRGPYS LARWFTAVRG LFRWAVDKGY
VQVDPTVKVT PPRVPTRVGG TRVGLRLDEA LTLREAPAVR SSGQLRADQR LSLRDEAILR
LLVESGPRVS ELCGANRSDI RVHEETGTPV LHVRGKGRKD RDLPLSKPTV EVIERYLAEE
RPAPPTPQRP HDMVERRRID DAAGALFVSV RGWRLSPRDV QRMVQRYAKE FLGRRATPHS
LRHTALTVLA RAGVDIATVA QIAGHASLST TSVYMDDSMS AAVEAIAESP LARP
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