| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19580 |
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| Symbol | |
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| ID | 8387285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2084631 |
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| End bp | 2086223 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976022 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003133804 |
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| Protein GI | 257055972 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.557425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0603451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGA GGTTGTCCGA AGAACTTTCC GGCAACGGTG GTGTCAGTGC GTTTCCCGGC
CGGCTTTCTC GCCGGGCCGA CCGTGGTGTT CACGCGGGAC GCACAGCGGT GTACCTGTTG
GTGGTGCTTA CGGCGGGGGC GTATCTGCCC AGCCCGCTGT ATCCGCAGTA TCAGGTCGCC
TTCGGCTTCA GCGACCTGAT GTTGACACTG ATCTACGCGA TGTTCGCGCT GGTCAGCGCC
CCTGCCCTGC TGTTGTTCGG GCCGGCGGCG GATGCGCTCG GCCCACGCAC GGTGCTGCGG
GTCGGCGTGG CGGTGGCCGC GTTCGCCTCG ACGTGTTTCG TGCTGGCCGA CGGGGTGGGG
TGGTTGCTGG TCGGCCGGGC CGCCCAAGGA CTGGCGCTGG GCGCGGTCAC GGGGGCGGCC
ACCATGGTGA TCACGGACCA CACTCCGTCC GCGAACCGGG GACGGGCGTC GGTGGTGGCC
AGTATGGCGT TCGTGGCCGG CACCGCGGTC GGTCCGATCG CCGCGGGGGT GGTGGCGCAG
TACGCCCCGC AGCCGCAGGT GTTGCCGTAC CTGGTGCATT TGGGGTTGCT GGCGATCGGC
TGGCACCGTG TGTCCGCCCT GCCCGCACCC CCGCAACGGG CGCGTCGGTG GAGGCCCACG
CGACCACGCA TCCCCACTGG TATGCGGCTG CGGTTCACCA CCGCCGCGGC GACCGGTTTC
CTCGCTTGGG CCGTGGCCGG CCTGTTCTTG GCGGTCATCC CGGCGGTGCT GAACCGGACA
GCCGGAATCA ACAATCTGGC GGTCATCGGT GGCGTGGTCG GCGCTGTGCT GGTCTGCTCC
ATGGCGGCGC AGCCCTTCGT GGCACGGTGC GGGGCGGGGC CGGCGCAGCT GGTCGGTCTC
AGCGCTCTGC TGCTCAGTCT CCTCGCCCTG GCCGTGACCG GTGGTGGGTC GCTGTCGATC
ACCATGGTCG CGGCCGCGGC GGCCGGTGTG GGACACGGGC TGGCCTACAG CGGGGCTGCC
GCCGCCGTCG AGGCCATCGC ACCCGAGGAC CGGCGAGGGG CGATCACCTC CGCGCTCTAT
CTCGCGTTCT ACGTCGGCTC CGGCGGTCCC TCGGTCGTCG TGGGGTTGAT GACCCTGTGG
CATCCGCTGG ACACCGCCGT GTCCTGGCTG GCTCTCGTCG CGACCGTCCT CACTCCCCTC
GTCGGCCTCG CCGTCGTGTT CACCGGTCGG TCTTTTGTGC CACGCTGGAG CCTGCCCACG
ACGACGAGCC GACCCCATCC AGGACCCGAA CAAAAGGGAG CGGTCGACCG AAACGACCGG
TCCACGCCCA CGGTGTCCTC GGTGTCCTCG GCGTCCTCGG TGTCCTCGGC GTCCACGGTG
TCCTCGGCGT CCACGGTGTC CTCGGTGTCC ACGGTGTCGT CATCGAACAC CGTGTGGCAA
CGCAGGCACC TCTGCCACCG GCATCCGGGC GTGGCACGGC CCGGATTCGC GCTCGACGAT
TCCTCGGACG ACGCTGGGAT CGGTACGGCT GCGGCGGAGG CCGCCGTGTC CGCTCACCAG
CCGCACCGGC CCGATCCGCA AAAGAGGTTC TAG
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| Protein sequence | MLARLSEELS GNGGVSAFPG RLSRRADRGV HAGRTAVYLL VVLTAGAYLP SPLYPQYQVA
FGFSDLMLTL IYAMFALVSA PALLLFGPAA DALGPRTVLR VGVAVAAFAS TCFVLADGVG
WLLVGRAAQG LALGAVTGAA TMVITDHTPS ANRGRASVVA SMAFVAGTAV GPIAAGVVAQ
YAPQPQVLPY LVHLGLLAIG WHRVSALPAP PQRARRWRPT RPRIPTGMRL RFTTAAATGF
LAWAVAGLFL AVIPAVLNRT AGINNLAVIG GVVGAVLVCS MAAQPFVARC GAGPAQLVGL
SALLLSLLAL AVTGGGSLSI TMVAAAAAGV GHGLAYSGAA AAVEAIAPED RRGAITSALY
LAFYVGSGGP SVVVGLMTLW HPLDTAVSWL ALVATVLTPL VGLAVVFTGR SFVPRWSLPT
TTSRPHPGPE QKGAVDRNDR STPTVSSVSS ASSVSSASTV SSASTVSSVS TVSSSNTVWQ
RRHLCHRHPG VARPGFALDD SSDDAGIGTA AAEAAVSAHQ PHRPDPQKRF
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