Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19130 |
Symbol | |
ID | 8387240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2034940 |
End bp | 2035656 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644975979 |
Product | pterin-4a-carbinolamine dehydratase |
Protein accession | YP_003133761 |
Protein GI | 257055929 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0088577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.516797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACC AGGACCTCAT CGAATCGGTG CGGGACCGCG TACAGCTCGA CGACAGCGAG CACGCCCGCC AAGCGGTGGA GGCCGTGCTG GCCACTCTCG GTCATTGCAT GACACCGGAC GCGCGAACTC AACTGGCCGA ACACCTCCCG GGTTTGCTGG AGCCGGCGAT GGAGGTGCCG GGGGATACCG AGATCCGTGA CAGTGAGGCG TTGTTGATCG AGATCGCTTA CCGGATCGAC AGCACCCCTG AGCGTGCGCG CTACATCGGA GAGGCACTCC TCGAAACGCT GCGCGAGATG GACCCGGATC TGGTCGACGA GCTGCGCGGT GAGCTGCACA CCGACCTGCT GGAGACGCTG GAACCGGAGG GCGAACCGCC CGAATGGGCC GGCAGCGTCG ACCCCAGTGC CCCCGTCGAG TTGTCCGACG ACGAGGTCGA GCAAGCCTTA CAACGGTTGC CGGAGTGGGA CGGTGACCAC AACGCCATCC AACGCACGGT CGTCCTGCCA CGGGACCGCC ACATCCCCTT GATCCACGGG GTGCAGACCG AAGCCCGCAA GACCGACAAC CACGTGAGGA TCGATCAGGA CGGCGACAGT GTGACGTTCA CCCTGAACAC AGCGAGCAAA GGGGTCGTGA CCGAATCCGA CATCGACCTG GCCGAACGTA TCAACAACGT GGTCGCCGAA GTAGGCTCCA GCGGTAAACC CGGCTGA
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Protein sequence | MKYQDLIESV RDRVQLDDSE HARQAVEAVL ATLGHCMTPD ARTQLAEHLP GLLEPAMEVP GDTEIRDSEA LLIEIAYRID STPERARYIG EALLETLREM DPDLVDELRG ELHTDLLETL EPEGEPPEWA GSVDPSAPVE LSDDEVEQAL QRLPEWDGDH NAIQRTVVLP RDRHIPLIHG VQTEARKTDN HVRIDQDGDS VTFTLNTASK GVVTESDIDL AERINNVVAE VGSSGKPG
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