Gene Svir_19130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19130 
Symbol 
ID8387240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2034940 
End bp2035656 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID644975979 
Productpterin-4a-carbinolamine dehydratase 
Protein accessionYP_003133761 
Protein GI257055929 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0088577 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.516797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC AGGACCTCAT CGAATCGGTG CGGGACCGCG TACAGCTCGA CGACAGCGAG 
CACGCCCGCC AAGCGGTGGA GGCCGTGCTG GCCACTCTCG GTCATTGCAT GACACCGGAC
GCGCGAACTC AACTGGCCGA ACACCTCCCG GGTTTGCTGG AGCCGGCGAT GGAGGTGCCG
GGGGATACCG AGATCCGTGA CAGTGAGGCG TTGTTGATCG AGATCGCTTA CCGGATCGAC
AGCACCCCTG AGCGTGCGCG CTACATCGGA GAGGCACTCC TCGAAACGCT GCGCGAGATG
GACCCGGATC TGGTCGACGA GCTGCGCGGT GAGCTGCACA CCGACCTGCT GGAGACGCTG
GAACCGGAGG GCGAACCGCC CGAATGGGCC GGCAGCGTCG ACCCCAGTGC CCCCGTCGAG
TTGTCCGACG ACGAGGTCGA GCAAGCCTTA CAACGGTTGC CGGAGTGGGA CGGTGACCAC
AACGCCATCC AACGCACGGT CGTCCTGCCA CGGGACCGCC ACATCCCCTT GATCCACGGG
GTGCAGACCG AAGCCCGCAA GACCGACAAC CACGTGAGGA TCGATCAGGA CGGCGACAGT
GTGACGTTCA CCCTGAACAC AGCGAGCAAA GGGGTCGTGA CCGAATCCGA CATCGACCTG
GCCGAACGTA TCAACAACGT GGTCGCCGAA GTAGGCTCCA GCGGTAAACC CGGCTGA
 
Protein sequence
MKYQDLIESV RDRVQLDDSE HARQAVEAVL ATLGHCMTPD ARTQLAEHLP GLLEPAMEVP 
GDTEIRDSEA LLIEIAYRID STPERARYIG EALLETLREM DPDLVDELRG ELHTDLLETL
EPEGEPPEWA GSVDPSAPVE LSDDEVEQAL QRLPEWDGDH NAIQRTVVLP RDRHIPLIHG
VQTEARKTDN HVRIDQDGDS VTFTLNTASK GVVTESDIDL AERINNVVAE VGSSGKPG