Gene Svir_18980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18980 
Symbol 
ID8387225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2016956 
End bp2018620 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content70% 
IMG OID644975965 
Product2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase 
Protein accessionYP_003133747 
Protein GI257055915 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.099299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.679289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CCACCGAGTG CGTCCGACCG GACGCCCCCG TCATCGTCAT CGGCAACGGC 
CCGGTCGGGC AGACCACCGC GCTTCTTTTG GCCCACTGGG GTATCGCCAC GATCGTCGTC
GACCAGCGCG CGCAACGGGA CCTGGTCGGG TCGAAGGCGA TCGCCCAGCA ACGCGACGTC
CTCGACATCT GGGACGTCCT CGACGGTGCC GGTCGGCAGA TCGCCGAGGA GGGCGTGACC
TGGAGCCGGT CCCGCACCTT CTACCGCGAA CACGAACTCT TCTGCACCGA GTACGTCGAG
GACGGCCATA CCTTCCCACC GTTCGTCAAC ATCTCCCAAA GCCGTACCGA GCAGATCCTG
GACGAACGGA TCGCCGCGAC GCCCCTGGTC GACGTCCGCT GGGGCCACCG CGTCGACGAC
ATCGTCCAGC ACGACGATCA CGTCGAACTG GCCTGCGAAA CACCCGAGGG GCGGGTGACG
CTGCGCGCCG CCTACGCCGT CGCCTGCGTG GGTGCGCGGG GTAACGAGGT GCGTGAGCTG
CTGGGCGTGG AGTTCGGTGG GCGCACTTTC GGGGACCGGT TCCTCATCTG TGACATCCGC
GCCGACCTCC CGGGCTGGCA CCGGGAGCGC CGGTTCTACT TCGATCCGGA GTGGAACCCC
GGACGACAGG TGTTGATCCA CCCGTGCCCC GACTCCACGT TCCGGATCGA CTGGCAGGTG
CCCGAGGACT TCGACCTCGA GGTCGAGGAG GAGACCGGGC GCTTGGACCA GCGGATCCGC
CAGGTGATCG GCGACCGGCC GTACGACATC GTGTGGAAGT CCGTCTACCG CTTCCACTCC
CGCATCGTCG ACCGGTTCCG CGTCGGTCGG GTGCTGCTCG CCGGCGATGC CGCCCACCTC
GTGTCGCCCT TCGGCGGCCG GGGACTCAAC TCGGGTGTGC AGGACGCTGA GAACGCCGCG
TGGAAACTCG CCGCCGTGCT GCACGGCATG GCCGGCGAGG AGTTGCTGGA CTCCTACCAC
GACGAGCGGT ACGCCGCGGC GCAGGAGAAC CTCGCCATCA CCGGGGCGAC GATGGAGTTC
CTCGTGCCCC AGACCGAAGC GGAACGGGCC CGTCGACTGG ACGTGCTGGA GCGGGCCGTC
GAGGACCCCG CGGCGCGAAG CGAGGTCGAC TCCGGCCGAC TGGCCGAACC GTTCTGGTAC
GTCGACTCGC CGCTGACCAC ACCGGACCCG GCTCGTCCGT TCGCCGGACG TCCGCCGAAG
GGGTCGGTAC CGCCCCCGAG CCCCGGTGTC CTCATCCCCG ATGCGCCGAT CGAGGACCCG
GCAACCGGTA CCGAGACTCG CCTGCGCGTG CTGGCCCGAC GCCGGATCAC CGTGCTCACC
GGGGATGCCG TCGACGCCGA GGCGCTACGG GAGGAGTTGC TCCGACTGGG ACGCGCCGTC
CCGGCGTTCC GGGCCGGCGA TCTCGGTGGG GAAGTGGCCG GCAGGACCGG CATCAGGGAC
GACGAGGTGT GGGTCGTGCG ACCGGACGGC CACCTCGCGG CGACACTGAC GTCCCCGCAC
GCGATTGCGG TGAACGCCGC GATCACGCGG GTTTTCGGAT CCCGGGTGTC GACGACGGTG
CCGACCGCCC GAACCCCGGT CGAGAACGTG TTTTCCCCGT CCTGA
 
Protein sequence
MNTATECVRP DAPVIVIGNG PVGQTTALLL AHWGIATIVV DQRAQRDLVG SKAIAQQRDV 
LDIWDVLDGA GRQIAEEGVT WSRSRTFYRE HELFCTEYVE DGHTFPPFVN ISQSRTEQIL
DERIAATPLV DVRWGHRVDD IVQHDDHVEL ACETPEGRVT LRAAYAVACV GARGNEVREL
LGVEFGGRTF GDRFLICDIR ADLPGWHRER RFYFDPEWNP GRQVLIHPCP DSTFRIDWQV
PEDFDLEVEE ETGRLDQRIR QVIGDRPYDI VWKSVYRFHS RIVDRFRVGR VLLAGDAAHL
VSPFGGRGLN SGVQDAENAA WKLAAVLHGM AGEELLDSYH DERYAAAQEN LAITGATMEF
LVPQTEAERA RRLDVLERAV EDPAARSEVD SGRLAEPFWY VDSPLTTPDP ARPFAGRPPK
GSVPPPSPGV LIPDAPIEDP ATGTETRLRV LARRRITVLT GDAVDAEALR EELLRLGRAV
PAFRAGDLGG EVAGRTGIRD DEVWVVRPDG HLAATLTSPH AIAVNAAITR VFGSRVSTTV
PTARTPVENV FSPS