Gene Svir_18660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_18660 
Symbol 
ID8387193 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1978912 
End bp1980317 
Gene Length1406 bp 
Protein Length468 aa 
Translation table11 
GC content67% 
IMG OID644975933 
ProductFAD binding protein 
Protein accessionYP_003133715 
Protein GI257055883 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.49198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTC GTGGCGACCA CGCCATCGTC CTCGGGGGGA GTGTGGCCGG GCTGCCGACC 
GCGAGGGTGC TCAGCCGTTA CTTCGACACG GTCATGATCG TCGAACGCGA CCCCTGCCCG
ATCGCGCCGA ACACCGCCCC GGTGTACCGC AGAGTCCGCA TCTGCACGGA CTCCTCTACG
GTGGCCGACT GTTGTTCGAC GAGATCTACG GTGACGAAGC CTTCACCGAG GCGATGCGTG
CCGTCGGGGG ACCGTATTTC GACTTCGGTC GGCATCAGGC CTTCCGCTTC CCGGAGGGTT
GGATCAAACG CACGAGCTGT GACCTGATGG TGGTCTTCGC GACCCGGTGG ACGATGGAAC
ACGTCGTCCG TCGGCTGACG CAACAGGTGC CGAACATCCA CTTCGTCCAG GGCCATGTGA
CCGGATTGCT CGCGGACACC ACGGGCGCCC GGGTCACCGG GGTGAAGGCC CGGGGCGAAG
AGGGAGAGTG GACGTTGGAG GCCGACCTCG TCGTGGACGC GTGTGGCCGT GGCTCCCGGT
CACCGAAGTG GTTGGAGAAA CTCGGCTTCA CCCCGCCCGA GGAGTCGGTG GTCCGCTCCT
TCCTCGGCTA CGCGACCGTG TACGGCTACG TGCCGGACGA CGCGTGGCCC GGCGACATCA
AATCCATCGC CGCCCCACCG TTTCCGGGTG CCACGCGCGG TGGTTTCGTC GTCCCCCAGG
AGAACGGACT GGTCGGCATC ATGGCCGCCG GACAGAGTCG GGACTACCCG CCGGGGGACG
AGGAGGGTTT CACCGAGTTC CTCCGGACCG CCATCACCCC GGTGATGTAC GACATGTGGC
GGCAGTGCGA ACCGGTGACC GAGATCGAGA CGACGAAGAC CTCCCAGAAC CGGCTCCGGC
GGTGGCACGA ACTCGACCGT CGTCCGCAGG GCTTCATCCC GATCGGAGAC GCCGTGGCGG
CGTTCAACCC GGTCTACGGA CAGGGGATGA CATCGGCCGT GTTGCAGGCG AAAACACTCG
GTGACCGGCT CGCCGAGAAC GACGACCTCG ATGCCGTCGT GACGGGTTTC CCGGAGGACG
CCGTCCAGGC GAGCCAGTTC GCGTGGAGCG CGGCCACCGA CGCGGACCTC GGTTTCCCCG
CGACAGAGGT CGAAAACCTC GCGGTGTCGG ACAAGGACCC CGAAACGATC TCCTACCTGA
GCGATATGCG ACGGGCGGCC ACGTTCGACG GTGGAGTGGC GAGCGCCTTC TTCCGGGCAC
AGGCCACGTT GAACGGCGGT CTGCTCTTCC AACCGCAGGT CATGGAGCGG GTCCGGACCG
TCCTCGCCGA AGCGGGACCC GACGAGCGAG ACCACGAGCG TCCGCCCGAG TGGTCCGAGG
ACGCCGAGCC CATCGCACTG TCCTAA
 
Protein sequence
MPVRGDHAIV LGGSVAGLPT ARVLSRYFDT VMIVERDPLP DRAEHRPGVP QSPHLHGLLY 
GGRLLFDEIY GDEAFTEAMR AVGGPYFDFG RHQAFRFPEG WIKRTSCDLM VVFATRWTME
HVVRRLTQQV PNIHFVQGHV TGLLADTTGA RVTGVKARGE EGEWTLEADL VVDACGRGSR
SPKWLEKLGF TPPEESVVRS FLGYATVYGY VPDDAWPGDI KSIAAPPFPG ATRGGFVVPQ
ENGLVGIMAA GQSRDYPPGD EEGFTEFLRT AITPVMYDMW RQCEPVTEIE TTKTSQNRLR
RWHELDRRPQ GFIPIGDAVA AFNPVYGQGM TSAVLQAKTL GDRLAENDDL DAVVTGFPED
AVQASQFAWS AATDADLGFP ATEVENLAVS DKDPETISYL SDMRRAATFD GGVASAFFRA
QATLNGGLLF QPQVMERVRT VLAEAGPDER DHERPPEWSE DAEPIALS