| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_18490 |
|---|
| Symbol | |
|---|
| ID | 8387176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1963540 |
|---|
| End bp | 1964925 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975917 |
|---|
| Product | citrate transporter, CitMHS family |
|---|
| Protein accession | YP_003133699 |
|---|
| Protein GI | 257055867 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2851] H+/citrate symporter |
|---|
| TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTTC TGACCATCGG CGTGATCCTC GCTGTGCTGC TGACCAACCG GGTGGCCGCG
GTGGTCGCGC TGGCGGGCGT CCCGATCCTG GGTGGGTTGA TCGCGGGCTT CTCCCCTGCG
GAGATCGGCG GGTTCGTCTC CGAAGGGCTC GGTGGCGTCG TCGGCGTCAC CACCATGTTC
GTCTTCGCGA TCATCTACTT CGGGCTGATG CGCGATGCCG GTATGTTCGA TCCGATCATC
GACCGCATCG TGTCATTCGC CGGGAACGCA CCGGTGACGG TGTGTGTGGC GACCACACTG
TTGGCGTGTG CGGCGCACCT GGACGGGGCC GGGGCCACGA CCTTCCTGAT CACCATCCCG
GCGATGTTGC CGCTGTTCGA CCGGCTCGGG ATGAGCAGGC TCGTCCTCAC CACGTGCGTC
GGGCTCGGTG CCGGTGTGAT GAACGTCCTG CCGTGGGGCG GCCCGACCGC GCGGGCGGCG
GCGGTGACCG ACGTCGCCGT CAACGACCTG TGGGTCCCGC TCATCCCGGC GCAGGTCGCC
GGGGTGGTCG CGGCTGTGGC CATCGCGTGG TGGCTCGGAC GTCGAGAGCG GCGCAGGCTC
GCCGGGATCA CCACCGAGCA CGCACAGCAG GCGCAGGGTG TCACCACAGT CGGGGGCTCC
CGCGTCATAA GCGGTGTCTC GGACTCCGTA TCCAGCGGCG CCGGTGGGGA CGGATCGGCC
GGTGAGGAAG GTGAGGAAGC AGGGGAGGAC CTGCGCCGCC CGCGGCTGTT CTGGTTCAAC
GTCGCCTTGA CGATCGCGGT CATCGCCTGT CTCGTGGCCG CGGTGGCACC TCCTGAGCTG
TTGTTCCTGG TCGCGGTACT GATCGCGTTG CTGGTGAACT ATCCGGGCCT GAAGCAGCAG
ACCGCCCGGA TCGAGGCCCA CTCCAAGGGC GCCATGCTCA TGGCCACCAC CCTGCTCGCC
GCCGGTGTGT TCCTCGGCAT CCTCGAAGGG AGCGGGATGA TCGACGCGAT GGCGTCGACG
GCCGCGGGAC TGATCCCGGA CGGAGCCGCG CCCGCACTGC CGCTGATCGT CGGTGTCCTC
GGGGTACCGC TGAGCCTCGT GTTCGGACCG GATGCGTATT ACTTCGGGGT CATGCCGGTC
CTGATCGGCG TGGGCGAGCA GTTCGCGGTG TCCGGCGTCG CCATCGCTTC GGCCTCGCTG
ATCGGGGAGG AGACCGTCGG ATTCCCGATC AGCCCGCTGA CCGGTGCGTT CTACCTGCTC
GTCGGACTGG GAGGGGTCGA GATCGGACGA CACATCCGAC ATCTCATCGG CTGGGCCTGG
CTCGTCAGCA TCGTGATGCT GCTCGTCGCC ATCGCAACCG GGGCGGTGCC GCTGTGGGTG
GCATGA
|
|---|
| Protein sequence | MGFLTIGVIL AVLLTNRVAA VVALAGVPIL GGLIAGFSPA EIGGFVSEGL GGVVGVTTMF
VFAIIYFGLM RDAGMFDPII DRIVSFAGNA PVTVCVATTL LACAAHLDGA GATTFLITIP
AMLPLFDRLG MSRLVLTTCV GLGAGVMNVL PWGGPTARAA AVTDVAVNDL WVPLIPAQVA
GVVAAVAIAW WLGRRERRRL AGITTEHAQQ AQGVTTVGGS RVISGVSDSV SSGAGGDGSA
GEEGEEAGED LRRPRLFWFN VALTIAVIAC LVAAVAPPEL LFLVAVLIAL LVNYPGLKQQ
TARIEAHSKG AMLMATTLLA AGVFLGILEG SGMIDAMAST AAGLIPDGAA PALPLIVGVL
GVPLSLVFGP DAYYFGVMPV LIGVGEQFAV SGVAIASASL IGEETVGFPI SPLTGAFYLL
VGLGGVEIGR HIRHLIGWAW LVSIVMLLVA IATGAVPLWV A
|
|---|
| |