| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17980 |
|---|
| Symbol | |
|---|
| ID | 8387125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1866748 |
|---|
| End bp | 1867743 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975866 |
|---|
| Product | metal-dependent hydrolase, beta-lactamase superfamily III |
|---|
| Protein accession | YP_003133648 |
|---|
| Protein GI | 257055816 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.182434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.52881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCG TCAAGGCCGA GGCCGCAGAA AACCGGAACC CGGTGCCCGA CACCGGTACA
CACGTGGTCA CGCTCGGCAC GGCCGCGGGC CCGGTGGTGC GCGGACCGCG GAACGGTATC
GCGACCGCTG TCGTGGTCAA CGGCTCCCTC TACCTGGTGG ATCTCGGCCT AGGCGTGACC
CGCCAGCTGT TCGAGACGGG GATGCCGGTG GATCGACTGC GTGCCATCCT GATCACCCAC
ATGCACTCCG ACCACATCGT TGAGCTGCCC GGGGTGCTGC TCTACAACTG GGGACCGAAC
GTGGGTGGGT TCACCGAGCC TTTCGCGATC GTGGGTCCGG GGCGTGCCGG TGCGTTGCCG
CGCGGGGCAC GGCCGGTGGT GACGCCGCCC ACGCCCGGTA CCGAGGACTT GGTGAGCAAC
ATCCTGTCGG CGTACGCCTA CGACATCAAC ATCCGGGTCC ACGACGAGGC GCGTGCCCCG
CTGGACGATC TCGTCCAACC ACGCGACATC CGGTTGCCGG GCGGATTGGG TGCCGGGCCG
CGAGGCGAAC TCGCCCCCGA GATGGACCCG GTGGAGGTGT ATCGGGACGA GCAGGTGCGT
GTCCTCGCGG CGTTGGTGGA CCATCCACCG GTGTTCCCCG CCTACGGGTT CCGCATCGAA
ACCCCGCACG GAGTGGTGGC GATCTCGGGT GACACCAGGG AACATCCGAA CGTCGCCCGG
CTGGCTCGCG ACGCGGACGT GCTCGTGCAC GAGGTGGTGA ACATGGACTA TTACCGCGAA
CGCGGCTTCA CCCCCGAGTA CCTGGAGCAT CTGGAAAAGA GCCACACCGA ACGCGCCGGG
GCCGCTCGGA TCGCCGCTGA GGCGGGGGCG CGGCACTTGG TGTTCAGTCA CCTGGGCGGG
ATCGCCACGG ACGAGGAATG GATCGCCCCG ACCCGCGAGT TCTACGATGG GCCGGTGACG
GTCGCCAACG ACGGCCAGGT CTTCTCGCTG GGCTGA
|
|---|
| Protein sequence | MSTVKAEAAE NRNPVPDTGT HVVTLGTAAG PVVRGPRNGI ATAVVVNGSL YLVDLGLGVT
RQLFETGMPV DRLRAILITH MHSDHIVELP GVLLYNWGPN VGGFTEPFAI VGPGRAGALP
RGARPVVTPP TPGTEDLVSN ILSAYAYDIN IRVHDEARAP LDDLVQPRDI RLPGGLGAGP
RGELAPEMDP VEVYRDEQVR VLAALVDHPP VFPAYGFRIE TPHGVVAISG DTREHPNVAR
LARDADVLVH EVVNMDYYRE RGFTPEYLEH LEKSHTERAG AARIAAEAGA RHLVFSHLGG
IATDEEWIAP TREFYDGPVT VANDGQVFSL G
|
|---|
| |