Gene Svir_17100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17100 
Symbol 
ID8387042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1761215 
End bp1761592 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content63% 
IMG OID644975786 
ProductProtein of unknown function (DUF1696) 
Protein accessionYP_003133568 
Protein GI257055736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.319625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTCT TCGACGGGAT GCTGGGCAAT GCCTCGAGTA TCGAACCTCG CGCGGCGATG 
CGGGAGTTCG GCCGTCTGCT GGCGCAGGGG GAGGAGATCC ATGCCGCCTA TCAGCTGATC
CGGGACTCGT TCCTCTTCAC CGATCGGCGT TTGATCCTTG TCGACAAGCA GGGCGTGACC
GGCCGAAAGG TCGAGTACCA CTCGATTCCG TATCGCAGCA TCACCCACTT CGCGGTCGAG
ACCGCCGGCA CCTTCGACCT CGACGCCGAA CTGAAGCTGT GGCTTTCCGG GGAGCCGGAG
CCGATCACGA AGCAGTTCGG CAAGGGGGTC GACGTCTACG AAGTCCAAGC CCTCCTGAGC
ACCTATGTGG TGCGGTGA
 
Protein sequence
MGLFDGMLGN ASSIEPRAAM REFGRLLAQG EEIHAAYQLI RDSFLFTDRR LILVDKQGVT 
GRKVEYHSIP YRSITHFAVE TAGTFDLDAE LKLWLSGEPE PITKQFGKGV DVYEVQALLS
TYVVR