Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16850 |
Symbol | |
ID | 8387017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1738961 |
End bp | 1739674 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975761 |
Product | predicted phosphoesterase, ICC |
Protein accession | YP_003133545 |
Protein GI | 257055713 |
COG category | [R] General function prediction only |
COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.352098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGA TCGCGGCGGT GGGAGACGTC CACCTCGGCG AGGACGCGCA GGGCCGGCTA CGGCCGGCGC TGGAGCACGT GAGCGAGCGT GCGGACGTGT TGTTGCTGGC GGGCGATCTC ACCCGGCACG GCACTCCCGC GGAAGCCCGC ATCGTCGCCC ACGAATTCCA CGATCTGGGG TTGCCGGTGT ACGCGGTGCT CGGCAACCAC GACTATCACA GTGACGCGGT CGACGAGGTG ACCGAGATCC TGTTCGGCGA AAGCGGCATC CGGGTGCTGG AAGGCAACGG TGCGGTGTTG CCGGTGAACG GGCAGACGGT GGGGATCGCC GGGGCGAAGG GCTTCGGCGG CGGATTCGAG GGACGTTGCG CGAGCGCGTT CGGCGAACCG GAGATGAAGA AGTTCGTCGG CCACACCCAG GAGGTCGCCG ACAGGCTCCG GTCAGCACTG GAGGCCCTGG ACGTCGACGT GCGGGTGGCG TTGATGCACT ACGCGCCCAT CCCGGACACG TTGCACGGCG AACCGTTCGA GATCTATCCG TTCCTCGGGG CCTATCAGCT CGGGGAGGCC GTCGACGAGG CGGAAACCGC GCTGGCACTG CACGGACACG CCCACAGAGG GTGCGAACAC GGAGTCACCC CCGGTGGTGT GCGGGTGCGC AACGTGGCCC AGCCGGTGAT CCGGTCGGCA TACGCGCTGT ACGACCTGGA GTGA
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Protein sequence | MIRIAAVGDV HLGEDAQGRL RPALEHVSER ADVLLLAGDL TRHGTPAEAR IVAHEFHDLG LPVYAVLGNH DYHSDAVDEV TEILFGESGI RVLEGNGAVL PVNGQTVGIA GAKGFGGGFE GRCASAFGEP EMKKFVGHTQ EVADRLRSAL EALDVDVRVA LMHYAPIPDT LHGEPFEIYP FLGAYQLGEA VDEAETALAL HGHAHRGCEH GVTPGGVRVR NVAQPVIRSA YALYDLE
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