Gene Svir_16850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16850 
Symbol 
ID8387017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1738961 
End bp1739674 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID644975761 
Productpredicted phosphoesterase, ICC 
Protein accessionYP_003133545 
Protein GI257055713 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.352098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGA TCGCGGCGGT GGGAGACGTC CACCTCGGCG AGGACGCGCA GGGCCGGCTA 
CGGCCGGCGC TGGAGCACGT GAGCGAGCGT GCGGACGTGT TGTTGCTGGC GGGCGATCTC
ACCCGGCACG GCACTCCCGC GGAAGCCCGC ATCGTCGCCC ACGAATTCCA CGATCTGGGG
TTGCCGGTGT ACGCGGTGCT CGGCAACCAC GACTATCACA GTGACGCGGT CGACGAGGTG
ACCGAGATCC TGTTCGGCGA AAGCGGCATC CGGGTGCTGG AAGGCAACGG TGCGGTGTTG
CCGGTGAACG GGCAGACGGT GGGGATCGCC GGGGCGAAGG GCTTCGGCGG CGGATTCGAG
GGACGTTGCG CGAGCGCGTT CGGCGAACCG GAGATGAAGA AGTTCGTCGG CCACACCCAG
GAGGTCGCCG ACAGGCTCCG GTCAGCACTG GAGGCCCTGG ACGTCGACGT GCGGGTGGCG
TTGATGCACT ACGCGCCCAT CCCGGACACG TTGCACGGCG AACCGTTCGA GATCTATCCG
TTCCTCGGGG CCTATCAGCT CGGGGAGGCC GTCGACGAGG CGGAAACCGC GCTGGCACTG
CACGGACACG CCCACAGAGG GTGCGAACAC GGAGTCACCC CCGGTGGTGT GCGGGTGCGC
AACGTGGCCC AGCCGGTGAT CCGGTCGGCA TACGCGCTGT ACGACCTGGA GTGA
 
Protein sequence
MIRIAAVGDV HLGEDAQGRL RPALEHVSER ADVLLLAGDL TRHGTPAEAR IVAHEFHDLG 
LPVYAVLGNH DYHSDAVDEV TEILFGESGI RVLEGNGAVL PVNGQTVGIA GAKGFGGGFE
GRCASAFGEP EMKKFVGHTQ EVADRLRSAL EALDVDVRVA LMHYAPIPDT LHGEPFEIYP
FLGAYQLGEA VDEAETALAL HGHAHRGCEH GVTPGGVRVR NVAQPVIRSA YALYDLE