| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_16730 |
|---|
| Symbol | |
|---|
| ID | 8387005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1727040 |
|---|
| End bp | 1727681 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975749 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003133533 |
|---|
| Protein GI | 257055701 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTCGG TGACGTCCAG GGGCGGATCG GCCGATCGGT ATGCTCACCA CGTGAGTGCT
CCCGAGAGCC GATCCGACGT ACAGCGGAGG TTGTTGTCGG CCGCGACGCG ACTGTTCGCC
GAACACGGTT TCGACCGCAC GTCGGTGAGT CAGATCGTCG AGGCCGCGGG CGTCACCAAA
GGCGCCATGT ATCACTACTT CCGTTCCAAG GACGATCTGC TCTACGAGAT CTACGCGCGG
GTGTTGCGGG AGCAGACACG GCGGTTGGAG GCGCTCGCCG CGAGCGGCGG ACCGGTGGCG
AAGCGGCTGC ACTCGATCGC CTCGGACGTG GTGGTCAGCA CCATCGCCAA CCTCGACGAC
GCCACGATCT TCTTCCAGTC CCTGCACCAG TTGGACCCGG TGATGCGCAA GACGGTGCGT
GCGGAACGAC GCCGTTACCA CGAACGGTTC CGAGGTCTCA TCGAGGAAGG GCAGCGCACG
GGGGAGTTCC GTGCGGACAA ACCCGCCGAG ATCATCGTCG ATTTCTTCTT CGGCGCGGTG
CACCATCTGG CCTACTGGTA CCGCCCCAGC GGGGAACTGT CGGCACAGCA GGTCGGCGAT
CACTTCGCCG ACCTGCTGCT CGACTCCCTC CGACCGCGCT GA
|
|---|
| Protein sequence | MTSVTSRGGS ADRYAHHVSA PESRSDVQRR LLSAATRLFA EHGFDRTSVS QIVEAAGVTK
GAMYHYFRSK DDLLYEIYAR VLREQTRRLE ALAASGGPVA KRLHSIASDV VVSTIANLDD
ATIFFQSLHQ LDPVMRKTVR AERRRYHERF RGLIEEGQRT GEFRADKPAE IIVDFFFGAV
HHLAYWYRPS GELSAQQVGD HFADLLLDSL RPR
|
|---|
| |