Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_16700 |
Symbol | |
ID | 8387002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 1724800 |
End bp | 1725435 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975746 |
Product | transcriptional regulator |
Protein accession | YP_003133530 |
Protein GI | 257055698 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGT CGCTGTCGGC CGATTTGTGG CCGGATGTTC AACCGGACGC GGCGCGGCGG CTCATGCTCG CTGGTGTCGA GTCCTTCGCC CAGCGCGGCT ACCACGCCAC CACCACCCGC GACATCGCGT CCAACGCCGG TATGAGCCCG GCCGCGTTGT ACGTGCACTT CCCGTCCAAG GCCGCGCTGC TGTTCGAGAT CAGTCGCAGC GGCCACGAGC AGGCCCTCAA CCTCGTGGCC AGCGCCGCCG AGCAGGCCGA CGATCCGGTG GAGGCCATGC GGGAGATCGT GGAGCGGTTC GTCGCCTGGC ACGCACGACG CCACACGGTC GCGCGGGTGG TGCAGTACGA ACTCGACGCG TTGCCGGAGA AGGAGTACCG CGTCGTCGTC GAGTTACGCC GGGAGATCGA ACGGATCGTG CACGATCTCG TGGTGGCGGG CGCCGAAGCG GGCGACTTCA CGGTGTCGGA CCCGATGACG GCCGCGCGCG CGGTGCTCTC CTTAGGGGTG GACGTCGCTC GCTGGTACAC CGAGCGGTCG CGCAAATCAC CCACCGCATT GGGCCGGGAG TACGGGGAGC TCGTCCTGCG CATGCTGGGC GCCGACCCGG ACCGGTCGCC GGACCGATCG AGCTGA
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Protein sequence | MSMSLSADLW PDVQPDAARR LMLAGVESFA QRGYHATTTR DIASNAGMSP AALYVHFPSK AALLFEISRS GHEQALNLVA SAAEQADDPV EAMREIVERF VAWHARRHTV ARVVQYELDA LPEKEYRVVV ELRREIERIV HDLVVAGAEA GDFTVSDPMT AARAVLSLGV DVARWYTERS RKSPTALGRE YGELVLRMLG ADPDRSPDRS S
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