Gene Svir_16700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16700 
Symbol 
ID8387002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1724800 
End bp1725435 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID644975746 
Producttranscriptional regulator 
Protein accessionYP_003133530 
Protein GI257055698 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGT CGCTGTCGGC CGATTTGTGG CCGGATGTTC AACCGGACGC GGCGCGGCGG 
CTCATGCTCG CTGGTGTCGA GTCCTTCGCC CAGCGCGGCT ACCACGCCAC CACCACCCGC
GACATCGCGT CCAACGCCGG TATGAGCCCG GCCGCGTTGT ACGTGCACTT CCCGTCCAAG
GCCGCGCTGC TGTTCGAGAT CAGTCGCAGC GGCCACGAGC AGGCCCTCAA CCTCGTGGCC
AGCGCCGCCG AGCAGGCCGA CGATCCGGTG GAGGCCATGC GGGAGATCGT GGAGCGGTTC
GTCGCCTGGC ACGCACGACG CCACACGGTC GCGCGGGTGG TGCAGTACGA ACTCGACGCG
TTGCCGGAGA AGGAGTACCG CGTCGTCGTC GAGTTACGCC GGGAGATCGA ACGGATCGTG
CACGATCTCG TGGTGGCGGG CGCCGAAGCG GGCGACTTCA CGGTGTCGGA CCCGATGACG
GCCGCGCGCG CGGTGCTCTC CTTAGGGGTG GACGTCGCTC GCTGGTACAC CGAGCGGTCG
CGCAAATCAC CCACCGCATT GGGCCGGGAG TACGGGGAGC TCGTCCTGCG CATGCTGGGC
GCCGACCCGG ACCGGTCGCC GGACCGATCG AGCTGA
 
Protein sequence
MSMSLSADLW PDVQPDAARR LMLAGVESFA QRGYHATTTR DIASNAGMSP AALYVHFPSK 
AALLFEISRS GHEQALNLVA SAAEQADDPV EAMREIVERF VAWHARRHTV ARVVQYELDA
LPEKEYRVVV ELRREIERIV HDLVVAGAEA GDFTVSDPMT AARAVLSLGV DVARWYTERS
RKSPTALGRE YGELVLRMLG ADPDRSPDRS S