Gene Svir_16680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16680 
Symbol 
ID8387000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1722765 
End bp1723703 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content71% 
IMG OID644975744 
Product1-phosphofructokinase 
Protein accessionYP_003133528 
Protein GI257055696 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 
TIGRFAM ID[TIGR03168] hexose kinase, 1-phosphofructokinase family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCA CGATCACGCC CAACCCTGCC CTCGATGTCA CCTACCACCT TCCGCACGCG 
CACTGGGGTG ACGTCAACCG GGTCCACCGG GTCTCCGAAA CCCCGGGGGG CAAAGGCGTC
AACGTCGCAC GCGTACTGCG CCAACTCGGC GAAACGGTGG TGTGCACGGG CTTTCTCGGC
GGGGACACCG GTGATCGCCT CCGCCGCCTC CTGGGCGACG TCGACCAGCG ATGGGTGGCG
GTGGAACAGC CGACCCGCCG CACCACCGCC GTCGTCACCG CCTCCGACAC CACCCTGTTC
AACGAACCCG GCGCACCCGT CGATGAGGCG GCCTGGCGAC GACTGACCGC TTTGGTGTCC
GAACTCGCCG GGGAAGGCGA CGTGGTGGTG CTGTCCGGTT CGATGCCGCC GGACACCCCC
GAGCACGTCG TGCACACACT CGTGGACACC GTCGTGGCGC ACGACGCACG CATCATCGTG
GACACCTCCG GACCTCTACT GCGCGTCGCG GCCCGGGCCC GAGCGACGCT GGTCAAACCC
AATCGCGACG AGCTGCGCGC CGCGACCGGC GAGGAGGACG TCCTCACCGG GGCACGGACG
TTGCTCAAGG ACGGGGCCCA CGGTGTCGTC GCCTCACTCG GTGAGGACGG CATGCTCGCG
GCCACGGGCG AGCCCGACCG TCCGCGAACC TGGCGAGCAC GTCCGTCGAC GGTGGTGCAC
GGCAATCCCA CGGGCGCAGG GGACGCCGCG GTGGCCGCGT TGGCCCGTGC GCTGCAGGAC
ACGGACGCAT CGCTGGAGAC GACGCTCGCC GGCTGCCTCG CCGACGCCGT CGCCCTGTCC
GCGTCCGCCG TCACCAGGCC CGTCGCGGGT GAGGTGGATC TCGCCTTCTG TCACCGTTTT
CGAACCACCG TCTCTGTGAC CACGCCGGAC GGCCGTTGA
 
Protein sequence
MILTITPNPA LDVTYHLPHA HWGDVNRVHR VSETPGGKGV NVARVLRQLG ETVVCTGFLG 
GDTGDRLRRL LGDVDQRWVA VEQPTRRTTA VVTASDTTLF NEPGAPVDEA AWRRLTALVS
ELAGEGDVVV LSGSMPPDTP EHVVHTLVDT VVAHDARIIV DTSGPLLRVA ARARATLVKP
NRDELRAATG EEDVLTGART LLKDGAHGVV ASLGEDGMLA ATGEPDRPRT WRARPSTVVH
GNPTGAGDAA VAALARALQD TDASLETTLA GCLADAVALS ASAVTRPVAG EVDLAFCHRF
RTTVSVTTPD GR