Gene Svir_16050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16050 
Symbol 
ID8386938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1650293 
End bp1651432 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content69% 
IMG OID644975683 
Producthypothetical protein 
Protein accessionYP_003133467 
Protein GI257055635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACGG CAGGGTTGGT GACGAACACC ACCCCACGTG CGGCCGGTCG GTCTCCCCGC 
CGTCGGCGCC CGAGGTGGTG GGTCGAGCTC CTGCTCGGAC TGGCCCTGTT CGGCGTGTAC
GCGCTGTTGG GCGCGCTGTC GTTGCCCGGA CACGAACGTC GGGCGTTCGT GCACGGTGAG
GACATTCTCG CCGTGCAGCG CATGCTGCAC ACCGACTTCG AACGGTCGGT GAACCATTGG
CTGGCCGACC AGGGCTGGTT GATGGTCGTA GCGAACTACG AGTACGCGTT CGGTTACCTC
CTCGTCACAC TCGTGGCGCT GGTGTGGCTG TATCGACGTA GGCCCCGGCA CTACCCGTGG
GCGCGGGACG TGTTCGCGAT CTCGACCCTG CTCGCGATCC TGTGCTTCTG GCTGTATCCG
GTGGCCCCAC CGCGACTGCT GCCCGACGCC GGCTTCATCG ACACCGTGCG ATTGGGGGGC
ACGTGGGGAT CGTGGGGTTC GCCGATGGTC GAGGGGGCCA ATCAACTCGC CGCGATGCCC
TCGTTGCACA TCGGCTGGGC TTTGTGGGTG GCCGTGACCC TGTTCCGAAG CGGCGCGGCG
TGGTGGGCGC GCATCGCCAG CATCGGGCAC GTGTTGGTGA CGTTCACGGT GATCGTCGCC
ACCGGTAACC ACTATTGGCT CGATGCGCTC GGTGGTGCCG TCGTGGTGGG GATCGGTGTT
CTGGCCGCGG ACCTCGCCCG GGGCAAACCG GTGATGTGGG ACGCTTCCGC TTCCAGGAGA
CTGTGGCGAC GCGGCCGCCC CGCATACACT GGCGCCGTGA CTGACACCGC AACCGACGCC
AAGACCCCCG TTCCTCCGAA GGCCGCCCAG CTCGCCGCCG CGCGCACGTT CGCCGCCGAA
CACGGCAAGC CGGTGAAGGC GGTCGTTCAG CGTATCGGTC GTGCCGGAGC CAGGGTGCTG
CTCGTCGGTG GTGACGGCGC CCTCGGCGAT GTCGTGGTCC CGAGCGTGGA GACCGGGGAA
GCGCTGATCG AGGCGGTGGA GGGGCTCGAG CGTTCCGAAT GGGACGCCGA CACCGTGGCC
GCCACCGTGA TCGGTCCTGA GCACCGCAGG AGGATGGCCG GCCCGCTGGC GCGCCGTTGA
 
Protein sequence
MLTAGLVTNT TPRAAGRSPR RRRPRWWVEL LLGLALFGVY ALLGALSLPG HERRAFVHGE 
DILAVQRMLH TDFERSVNHW LADQGWLMVV ANYEYAFGYL LVTLVALVWL YRRRPRHYPW
ARDVFAISTL LAILCFWLYP VAPPRLLPDA GFIDTVRLGG TWGSWGSPMV EGANQLAAMP
SLHIGWALWV AVTLFRSGAA WWARIASIGH VLVTFTVIVA TGNHYWLDAL GGAVVVGIGV
LAADLARGKP VMWDASASRR LWRRGRPAYT GAVTDTATDA KTPVPPKAAQ LAAARTFAAE
HGKPVKAVVQ RIGRAGARVL LVGGDGALGD VVVPSVETGE ALIEAVEGLE RSEWDADTVA
ATVIGPEHRR RMAGPLARR