Gene Svir_16030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_16030 
Symbol 
ID8386936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1648499 
End bp1649419 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content68% 
IMG OID644975681 
Producthypothetical protein 
Protein accessionYP_003133465 
Protein GI257055633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACTTC CCGTCGTTCT CGGCTTCACC GCAGCGTTTC TGTTCGCCGC GTCGGCCGCT 
TTGCAACGCC GCGCGGTACT GCACGCTGCG CATTCCGACC CCGCGCGTAA GGCCGCCACG
CACCGGTTGC CGGTGCTGTG GCTTTTCCGG CGGTTGCTGA GGCAACGGGT GTGGTTGCTG
GGGTGGATCA CCAACCTCTG TGGCTTCTGT TCCCAGGCGG CGGCGTTGCA CTTCGGTTCG
GTGGCCTTGG TGCAGCCGCT GCTGGTGACC CAGCTGTTGT TCGCGCTCCC CATGGCGTCG
GCGGCCGTGC GACAGTGGCC GTCGCTGCGG GACTGGCTCT CCGCGGGGGC GATCAGCGGC
GGCGTGGCGT TGTTCTTGTC CGCGGAAAGA GCCGCTCCGT TGGAGGGCGC GGCCGACCGG
AGTCGGTTAC TGCTGGCCGT GGGGGTGGCG GCGGTCACCG TCATCGCGTT ACTGCAGCTT
GCGCAACGAC GGGGACCGTT GGCCTACAGT GCGCTGATCG CCGCGTCGGC GGGCATCTGC
TACGCGATGA GTGCAGCCAT GATCAAGGTG ACGACGGACA GCCTGCTCAC CAGGGGCGTG
GCCGCGACCG CTCTGGACTG GCCCGGCTAC CTGATCGCGG TCACGACGTT CTCCGGGCTG
GTGCTCGGTC ACCAGGCGTA CGGTTCGGGA TCGCTGTCGG TCGCCGTGGC GGTGATGTCG
ATCGTGAACC CCGCGGCGAG TTTCGCGTTG GGACTGTTGG CGTTCGATGT CACACCCGTG
GCCGGTCCGG GTCCACTGGC CGCTGTGGCC GTTTCCGGTG TGCTGCTGGC CGTGGGAGCG
TTCGGCCTCG CCCATTCGCC TGCCGTGCGC TTGGAGACGC GTACCACAGC GAAGCAGGGT
GTTTACCCCC ATCCGGGGTA G
 
Protein sequence
MVLPVVLGFT AAFLFAASAA LQRRAVLHAA HSDPARKAAT HRLPVLWLFR RLLRQRVWLL 
GWITNLCGFC SQAAALHFGS VALVQPLLVT QLLFALPMAS AAVRQWPSLR DWLSAGAISG
GVALFLSAER AAPLEGAADR SRLLLAVGVA AVTVIALLQL AQRRGPLAYS ALIAASAGIC
YAMSAAMIKV TTDSLLTRGV AATALDWPGY LIAVTTFSGL VLGHQAYGSG SLSVAVAVMS
IVNPAASFAL GLLAFDVTPV AGPGPLAAVA VSGVLLAVGA FGLAHSPAVR LETRTTAKQG
VYPHPG