| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15430 |
|---|
| Symbol | |
|---|
| ID | 8386876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1586135 |
|---|
| End bp | 1586791 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644975621 |
|---|
| Product | prepilin signal peptidase PulO-like peptidase |
|---|
| Protein accession | YP_003133405 |
|---|
| Protein GI | 257055573 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGG GTCTTCTGCT GATCTGCCTC GGGGCCGTCA TCGGTGGGGT CGCCGGTCGG
GCTTTGGCCC GTGCGCGTCG GGCCGCCGCC GTCCCGGTCG GGTGGTGTGT CGCCGCGACC
GGCGCGCTGT GGGGCATGGT GTGGGGGTTG GGGCGAGTCG GTGCACTGCC GGGTTGGTGG
ATTCCGGTGC CCTTGGCGGC CACCGCGTTC GCCGTGCCAC TGGCCTGTGC CGATCTGCTG
TACCACCGGT TACCGGACGT GCTCACCCTG CCGGCGTACG CCCTTGCGGG TGCGGCCGTG
GGGGCGGCGG CGATCAGCGG CCCCGGCCCG CCGCTGTTGG GGGCGGCTTT GATCGGAAGC
GGTATGACCC TGGCGATCCA TGCGCTGGTG CACGGGATCG CTCCGGATTC ACTCGGGGCC
GGGGATGTCA AGCTCTCGGG CAGCCTGGGA ATGTTGACCG CCGCGGCGGG GTGGCCGACC
TGGATGTTCG CGTTGGTACT GGCGTCGGTG TTCACCGCGG GATTGGCCGG AGCGGCAGCG
CTGGTCGGTT CTCGGCGGTG GCGAAGGGGC GTGCCACACG GTCCGGGACT GCTGCTGGCC
ACCTGTGTGG GGGTGATGTT TCCGGGCGAG TTGGTCGTGG TGGGTATGGG CAGCTGA
|
|---|
| Protein sequence | MGEGLLLICL GAVIGGVAGR ALARARRAAA VPVGWCVAAT GALWGMVWGL GRVGALPGWW
IPVPLAATAF AVPLACADLL YHRLPDVLTL PAYALAGAAV GAAAISGPGP PLLGAALIGS
GMTLAIHALV HGIAPDSLGA GDVKLSGSLG MLTAAAGWPT WMFALVLASV FTAGLAGAAA
LVGSRRWRRG VPHGPGLLLA TCVGVMFPGE LVVVGMGS
|
|---|
| |