| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15350 |
|---|
| Symbol | |
|---|
| ID | 8386868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1581019 |
|---|
| End bp | 1581696 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644975613 |
|---|
| Product | predicted phosphoribosyltransferase |
|---|
| Protein accession | YP_003133397 |
|---|
| Protein GI | 257055565 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1926] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.652419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.519761 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACGG AACGGGTCTA CGCGGACCGC AGCGCGGGAG GACTCGCGTT GGCGGAGTTG
GTGCGGGAGA GGTCCTGGGT CGACCCGGTG GTCCTCGGCC TGGCCCGAGG TGGCGTCCCC
GTGGCCGCCG AGGTGGCCTC CGCCCTGCAC GCACCGCTGG GGGTCGCGGT CTCCCGCAAG
ATCGGTTCCC CGGGACACCC CGAGTTCGGC ATCGGGGCCG TCACCCCCCA CGGCCCCGTC
GTCTGGGACG AACGCAGCCT CGACTTACTC GGTCTGACCC ACGACGATCT GGAACCGGTG
GTCGAACGCG AACGCCGGGA AGCGCTTCGC AGACTCGACC TCTACCAGGG GGACCGCGAG
CCCGAACGCC TCGAGGGGCG GGACGTGATC GTGGTCGACG ACGGGCTCGC CACCGGGGTG
ACGGCGAGGG CGGCGTTGCG TTCCCTGCGG GAGAGCCGAC CTCGCACACT CGTGTTCGCC
GCCCCCGTCT GCGCCCCACA GGCGATTCCG GCTCTGCGTG AGGAAGCGGA CTCGGTGCTG
TGTGTGTCCG AACCGCCGTT CTTCCAAGCC GTCGGCCAGT GGTACTCCGA TTTCTCGCAG
GTCGACGACG ACGAGGTGGT GGCGTTGCTC GACCGGTACG CGGGAGGTAC CGATCGGTAC
TCCGGAGGCG GACGATGA
|
|---|
| Protein sequence | MTTERVYADR SAGGLALAEL VRERSWVDPV VLGLARGGVP VAAEVASALH APLGVAVSRK
IGSPGHPEFG IGAVTPHGPV VWDERSLDLL GLTHDDLEPV VERERREALR RLDLYQGDRE
PERLEGRDVI VVDDGLATGV TARAALRSLR ESRPRTLVFA APVCAPQAIP ALREEADSVL
CVSEPPFFQA VGQWYSDFSQ VDDDEVVALL DRYAGGTDRY SGGGR
|
|---|
| |